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Information for unigene UN48138

FASTA Sequence
Unigene ID: UN48138Length: 960 SSR 
AAAAGCAAAAAGCTTCTTCAAAGGATATGATTCAAGTTATACAAAGACTACACCCTAAGAAAAGCTCTAACCACCATTACAGCCCA
TGTATTCATTCATTCAATCTCCCCCAATTCACTAACCTAAACCCCAATCTTCTTTCACTTCTTCACCTTCCTCGTTGAAACCCTCT
TCGCCGGAAACTTCACAGCCTTCGCCTTCACGCTCTTAGCCGGAGCCTTCTTAGTTACAGCCGCTGCTTTCTTAACAGCAGCAGGA
GCAGCCTTCTTCCCTGGAGAAGTTCTAGTCGAAGTCCTCGCCGCTTTAGCAGGGCTCTCTTTAGCCTTAGGCTTAGCAGCAGCAGC
AACAGCTTTAGTCTTGGACACAGCAGCCACTGTCTTCGTCTTCGGTTTAGGTTTAGCAGCGGCGACTTTAGCCTTGGGCTTCACAG
CTACAGCAGCTTTGGTCTTCTTGGATCCTTTCGCAGCCGGTTTAGCAGCCTTCGGTTTAGCTACGGTCGCCTTCTTCTTCTTAACC
GGAGCCGGTTTAGGAGCAGGAGCAGCAACGGCGGTTGATTTAGCAGCGGAGGAGGGGAGCTTGAAGGAGCCTTTGACTTTGACGAG
CTTCCCGGAAGCGACGAGTCTTTTGAGATTGACGAGGAGAAGCTTCCTGAACGTCGGAGGAAGCGTCTTCTGCTTCTCCTCTATGA
ACTTCTGAATCGCGTATTGGCTAGATCCGGTTCTCTCCTTCAACGTCGTGATCGCGTCTTTAATCATCTCTTCGTAGGTAGGGTGA
GATGAAGAAGATCTCTTCCTTGGAGCTTTCGCTGCAGGCTTCTTCTTCGGAGCTTTAGCTTCCTTCGTCTTCTTCGCTTTCTTCTC
ACTCGCCGCCGGTGCAGTCACCGTCTCTTCGACGTTGGTTGGAACGGTTTCTTCCTCTGCCGACATCTTTCTCTCTCTCTCTATAA
GTTTTATGCGATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180620 histone H1.2 [Arabidopsis thaliana]7574e-078
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]7378e-076
NP_172161 histone H1.1 [Arabidopsis thaliana]6562e-066
CAA44312 histone H1-1 [Arabidopsis thaliana]6454e-065
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]6266e-063

Swiss-Prot top hits (Blast detail)Scoree value
P26569 Histone H1.27572e-079
P26568 Histone H1.16569e-068
P08283 Histone H15814e-059
P37218 Histone H15053e-050
P23444 Histone H14462e-043

TrEMBL top hits (Blast detail)Scoree value
Q40509 Histone H15924e-059
Q84UY6 Histone H1 subtype 55791e-057
Q84VS9 Histone H15791e-057
Q6ZYF1 Histone H15744e-057
B9GS56 Histone H15638e-056

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.27581e-080
AT1G06760.1 histone H1, putative6576e-069
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2633e-023
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1934e-015
AT1G14900.1 HMGA (HIGH MOBILITY GROUP A); DNA binding1584e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information