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Information for unigene UN48146

FASTA Sequence
Unigene ID: UN48146Length: 1213 SSR 
GGGTCTTTTCCTTTAACACTCTTTCAAAGTTGTAACCTTTGCGGTGGTTAAGAGATCATCATCATCATCTCTCAGATCAAATTTGC
AACGAGAGTGTTGTTGTAAAAGGGATGTCAGGTCGGTACGATCGAAACCCCTTCGCCGAAGGAGACGAAGTCAATCCTTTTGCTAA
TCCTGGAAGTGCACCGGCTGCTTCGAGTTCCAGACTATCGCCTCTGCCTCCGGAACCTGCTGGTTTTGGCTATGGTCGCACCGTTG
ACGTTCCTCTTGACAGACCTGCTGGGTCTGGTGCAAAGGATCTGAAGAAGAAGGAGAAGGAGCTCCAAGCCAAAGAAGCTGAGCTT
AAACGACGCGAGCAGGATATCAAACGGAAAGAGGATGCTGCTGCACGAGCCGGAATTGTAATCGAGGTGAAAAACTGGCCGCCCTT
GTTCCCTCTTATCCACCATGACATTGCAAATGAAATTCCCATTCCTCTCCAACGGCTTCAGTATATTGCTTTTTCTACTTATTTGG
GGTTGGTTCTTGCACTTTTCTGGAACATCATCGCCGTTACTACAGCTTGGATCAAGGGAGAAGGAGTAACGATTTGGCTTCTTGCT
CTTATTTACTTCATCTCGGGTGTCCCCGGAGGCTATGTGTTATGGTATCGTCCTCTCTACCGTGCCTTCAGAAATGAGAGCGTATT
GAGCTTTGGATGGTTTTTCTTGTTCTACATGCTCCACATAGCTTTCTGCGTCTTTGCTGCAGTTGCTCCTCCTATTTTCTTCAAAG
GAAACTCACTTGCGGGAATATTACCTGCGTTAGATATGTTGAGCAGTCAGGCATTGGTCGGAATCTTCTACTTCATCGGGTTTGCA
TTTTTTCTGCCTTGAATCAGTGGTCAGCATCTGGGTTATTCAGGTCTCTTTCCTTGTCTTTAGAAACCGAAAAGATATAGTCTCTG
CATCGGTATCGTTTTCCGAGGTAAGGGACTCTTTTAACACTTGAAATGGCCAATTTTACGTGTGCAGCAAGTATACATGTACTTCC
GAGGGAGCGGGAAAGCAGATGAGATGAAAAGGGATGCTGCAAGAGGAGCCATGAGAGCTGCCATATGATGCACAGATGATTTGAAC
TCATGATCTCTCCTGAAGCCATGGGTTGTGATGTGTAACTTTTTTACATTCTTCACTCTTTCACCTTTTTTGTTTTGTTTTTACAG
CAGCAAACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172584 secretory carrier-associated membrane protein 5 [Arabidopsis thaliana]11537e-124
XP_002888095 hypothetical protein ARALYDRAFT_475195 [Arabidopsis lyrata subsp. lyrata]11402e-122
XP_002889854 secretory carrier membrane protein family protein [Arabidopsis lyrata subsp. lyrata]11366e-122
NP_176320 secretory carrier-associated membrane protein 3 [Arabidopsis thaliana]11341e-121
NP_001185278 secretory carrier-associated membrane protein 3 [Arabidopsis thaliana]11341e-121

Swiss-Prot top hits (Blast detail)Scoree value
Q9SXA5 Secretory carrier-associated membrane protein 511587e-126
Q9M5P2 Secretory carrier-associated membrane protein 311409e-124
Q9SKT3 Secretory carrier-associated membrane protein 19347e-100
Q8H5X5 Secretory carrier-associated membrane protein 19042e-096
A2YMP7 Putative secretory carrier-associated membrane protein 19033e-096

TrEMBL top hits (Blast detail)Scoree value
C6TA62 Putative uncharacterized protein9762e-103
C6TGC4 Putative uncharacterized protein9681e-102
C6KI56 Secretory carrier membrane protein9582e-101
B9S5Z8 Secretory carrier membrane protein, putative9483e-100
B9N299 Predicted protein9393e-099

Arabidopsis top hits (Blast detail)Scoree value
AT1G11180.1 secretory carrier membrane protein (SCAMP) family protein11587e-127
AT1G61250.1 SC3 (SECRETORY CARRIER 3); transmembrane transporter11408e-125
AT2G20840.1 secretory carrier membrane protein (SCAMP) family protein9346e-101
AT1G03550.1 secretory carrier membrane protein (SCAMP) family protein8612e-092
AT1G32050.1 secretory carrier membrane protein (SCAMP) family protein6622e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
91  50%

Unigene MembersMember information