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Information for unigene UN48174
| FASTA Sequence |
| Unigene ID: UN48174 | Length: 825 |
SSR | | GTCAAAACTATTAACTTGAATACCTATTATTTCAACTTTAAGTTGTAAAGAAAAGAAGACACTATTTGTTTAAGACTGAAATACAT
GCTTACAGGACATTCTTGTAGTAACATTCCATGGCTTGCCTCCATGATGGCAAGAGATCTTTTACACACAGACACATAACCCGTGA
GGGATAAGATAGAAACCGTTTAAATGAAAACAGAGAAACAGGTAGTAAGAAATATATATATTTACCTTCAGGAGGCCATTGATTTG
GATAACGCTGAGCCAGAGCTCCTTCCAAAGAGCCAAAGTAAAAGCTTTCCTTAGAATCACCTGTGGAGGAAGTCAAGGAGGGGTCG
AGTTTCTCAGCATGGAGTGGAGTATAACCGAGAAGATCGCGGCGGAGTAAAGACATCTTCTCATCTAGTGGGAGATTAAAGAAGCT
TTTACTCTCTCTCAAAACCTCTTCCATCAATTCTTCAGAGATGCCATGGTTCTTGACATAGAAGAACCCATGTTCAAGACATGCCT
TATTAACAGAAAAGTAACATCGAAAACAGTTTAGAAATTATTAGAGCATAGAATTGTCTCTAACCTCTCAAGCAAACAATAATCTG
ATCACCAAGCAGAGCTATTAGTATATAATAAAGAAGAAGCACAGTTTCTACTCTGGTGGAAACAGAAGATACAGATAACAGAGAGA
GTGAGAGAGAGAGAGAGAGACGATGGTGAAGACGTACCTTACGGATCAACTTTGCGGTGAGGATATCTTGTCCGGCGAAGAGATAT
CGATGATAGGAAGTACAAGTGACGTCTCCATTCTCGTGGTCTCTCGAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB88075 hypothetical protein [Arabidopsis thaliana] | 431 | 2e-040 |
| CAB96198 hypothetical protein [Capsella rubella] | 332 | 6e-029 |
| AAG40055 AT4g16770 [Arabidopsis thaliana] | 308 | 3e-026 |
| CAB96197 hypothetical protein [Capsella rubella] | 308 | 3e-026 |
| CAB46041 gibberellin oxidase-like protein [Arabidopsis thaliana] | 308 | 3e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q76NT9 1-aminocyclopropane-1-carboxylate oxidase | 160 | 2e-010 |
| A6BM06 1-aminocyclopropane-1-carboxylate oxidase | 160 | 2e-010 |
| Q39110 Gibberellin 20 oxidase 1 | 132 | 4e-007 |
| Q54RA4 Probable iron/ascorbate oxidoreductase DDB_G0283291 | 128 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M3R8 Putative uncharacterized protein (Fragment) | 431 | 1e-040 |
| Q9LEM3 Putative uncharacterized protein | 332 | 4e-029 |
| Q9LEM4 Putative uncharacterized protein | 308 | 2e-026 |
| Q9M3R7 AT4g16770 | 308 | 2e-026 |
| Q9SUK7 Gibberellin oxidase-like protein | 308 | 2e-026 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16770.1 iron ion binding / oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 308 | 1e-028 |
| AT4G16765.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 248 | 1e-021 |
| AT4G16765.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 248 | 1e-021 |
| AT1G35190.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 206 | 1e-016 |
| AT1G35190.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 206 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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