Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48187

FASTA Sequence
Unigene ID: UN48187Length: 772 SSR 
GCCTTATAAGTGCCTTTCGTGATTGTAAGAACAGAAACAGTTTACAAGAACCAAAGACGCTGAAGAAACATAAAAATGTCACCCTA
GCTCACTTTTTATTCTCATCTTGCGTACATCTAAAGCTTGTTTGAGAGAGTTTGTGGACCAACAACACATTCCTCATTTGGCAACT
TTCTTCTTCCTCAGAAGATCTTCCACTTGGAGCTCGTTGATCTTAGCAGCTAGAATGAAGTCGTTCTCGGTCAAACCACCTATGGC
ATGTGTCCATATGTCGATCTTCACATTATTCCAGCCTACCAGATGCAAATCCGGGTGATGACCTTCTGATTCAGCGATATCAGCTA
CACGTTTGAAGAAGTCTAGTCCTTTTGTAAAACTTTTCACCGTCCACGATCGATGCAGCTTTAATGTGCCATTGTCATTAGCCATA
TCCCATCCAGCAACCTTCTGAAGTAGTTCTTGGGCACTTTGTTCAGTCATGGGGTGTAGATCCTTAGCGTTGCATGGGACACACTT
TTTTGCTGATAAATCTTGTAGGGAGGAGCAGAAAGTTCTAGACCCAGAAGAAGCAGAGTCACCAATTGCACTATCTTGCGACATAG
CAGCGCTCGTCCAATGAACAAAGCTCCTGTGACGTCGTCCGTACAGATTGTGGAACGATGACGCCGCTAGAACCTGAAAGTGTCGC
AAAAAGTATGAGGCACAATGGAAGATATGTGTACATAAGACACGAGGACAGAGAGAGAGAGATCAGTTTGTTTTTTTTACCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893582 predicted protein [Arabidopsis lyrata subsp. lyrata]7278e-075
NP_174274 transcriptional coactivator/pterin dehydratase [Arabidopsis thaliana]7152e-073
BAC41856 unknown protein [Arabidopsis thaliana]7116e-073
XP_002273897 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]5252e-051
XP_002317303 predicted protein [Populus trichocarpa]5046e-049

Swiss-Prot top hits (Blast detail)Scoree value
B3QQ83 Putative pterin-4-alpha-carbinolamine dehydratase2435e-020
Q8KFI4 Putative pterin-4-alpha-carbinolamine dehydratase2363e-019
Q3B6N5 Putative pterin-4-alpha-carbinolamine dehydratase2283e-018
A1TZA3 Putative pterin-4-alpha-carbinolamine dehydratase2175e-017
A8EXY4 Putative pterin-4-alpha-carbinolamine dehydratase2166e-017

TrEMBL top hits (Blast detail)Scoree value
Q6QJ72 PCD/DCoH-like protein 27151e-073
Q8GZ70 At1g298107114e-073
B9I112 Predicted protein5044e-049
B9N9B9 Predicted protein4911e-047
A5BSC3 Putative uncharacterized protein4902e-047

Arabidopsis top hits (Blast detail)Scoree value
AT1G29810.1 dehydratase family7166e-076
AT5G51110.1 4-alpha-hydroxytetrahydrobiopterin dehydratase2354e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information