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Information for unigene UN48189

FASTA Sequence
Unigene ID: UN48189Length: 858 SSR 
CAACAAAATCTTGATCATCCTACAAAGTAAGGAGGGTTTTGGAAGTAATCCAAGAATAAAAAAAAGGCTCATGACAAAAGAAAATG
AAATTTCCTCAGTCTGATGATAACTTGAGACAAACGTTGAGATATAAAAATCTTAGAAAACACGGGTTGGTGGACTCATTGTGCTC
TTCAAGTACAAGCACCTCACATTTTGCCAGTTTTTCTTCAAGAGGGAAACAAGGAAGTTGACGCTCATCTGAACATTCTGGAAGAT
CTGCTTCTCCTCCATGCCGAGATTTCCAACAGCGACACCCATGCAAAGAACCTTCTTAAGCTGGAACTTCACTGTTGCCTTGGTCT
CATTCACTTTGGATTCCAAAGACTCTTGGTGGCTAACAAGAGTTGGGAACTTTCCTGCCTTGTTGAGACCAGGACCAAGAAGACGG
GGAATCTGTTTAATAACAGATTCAGAAGCAAGGAAAGCATGGAACTTCTTGGCTAGCTTCTTAACAAGCTTCTTGTTCTTGTTCAG
CTTCTTAAGTGCTTCCACATCCATAGACTCCAACCCAATCTTCTCAGCCTCTTCAACGTGCTGGGCGTCGCCGAGCATGCAAATCT
TCATCTTAGGCCTAGGAAAGGGGCAACTTAACGGAACCGCTAAACCTCTTGTCCTTTTGAGGGTCATAGTTCTTAAGACCAATCTG
GAGCTCGATTGTCTCGGTGAACTTGCGAGGCTTCGTCTCCTTGCAGTGAGTGATGATGGACGATATCGCCTCTCTCACGGCTTCAC
TCTGGAGCTTACTCATTTTGGCACTTTCTCAGAGCTACTATTCTCTCCTTTGTAATAGATCGGAGACAGAGAGAGAGAGAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197636 60S ribosomal protein L10a-3 [Arabidopsis thaliana]7905e-082
NP_563813 60S ribosomal protein L10a-1 [Arabidopsis thaliana]7762e-080
XP_002889688 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]7762e-080
NP_565654 60S ribosomal protein L10a-2 [Arabidopsis thaliana]7645e-079
XP_002879155 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]7645e-079

Swiss-Prot top hits (Blast detail)Scoree value
P59231 60S ribosomal protein L10a-37902e-083
Q8VZB9 60S ribosomal protein L10a-17769e-082
P59230 60S ribosomal protein L10a-27642e-080
Q9VTP4 60S ribosomal protein L10a-25967e-061
Q963B6 60S ribosomal protein L10a5903e-060

TrEMBL top hits (Blast detail)Scoree value
A9NNV9 Ribosomal protein7492e-077
Q677B5 Ribosomal protein (Fragment)7492e-077
A9NNS9 Ribosomal protein7473e-077
B7F845 Ribosomal protein7473e-077
B8B9K6 Ribosomal protein7473e-077

Arabidopsis top hits (Blast detail)Scoree value
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)7911e-084
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)7911e-084
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)7776e-083
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome7652e-081
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome7652e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information