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Information for unigene UN48198
| FASTA Sequence |
| Unigene ID: UN48198 | Length: 1168 |
SSR | | CATGAGAACAACTGCTTTAAATGAAGACACAACTAATTCATGAGTTTATTTATAGAGTTTTAAGAGACATTAATTAAACACACATG
ATCAATCAATCATCAATTAAGTCACAAAATCTGCAAAACCAAAGTTGCTCATATAACAGTAAATTAAAAAACTCAAAAACCACAAA
TTACAATTCCCAAGCTTGCAATCAATAACAAAATCAAAAAAGTTTCTCATGAAGTTATTTCATGAACCAACCTTTCAAGAATAGGG
TAGGCAAAATAGAGCACCAAACCAGAAGGAACGGCAAGAAGAATGGTGAGGAGGAAGTAGAGAGCAAGAACGACGAGGCTGCCAGG
TATAGCAAAGAAGACAATCAAAAGGAAAACGACCACAAAAGGAAACTTGGAGGTGAAGGAGATGAAGAAATCAATCGACTTGTGGA
ACGAGAACTGCTGTCTGCTTCTGCTTGGTTGGCTCCTCCCAACAGGCCTTGCAATCAGATTGCTATTGCTATTGCTGCTGCAGTAT
TGGTGGTTATCATGTCTTCTGGACCTGTCACCGTTGAGAGACTCAACCATCCAGAGGAGGAAGAAGTTCTTCTTAGGGAACTTGAG
GACGCCGTCGTAGACGACTCTCAAGGAAAGAAGCTGACACCAAGGGCAGGAGACGAGGAAAGGGAGCCTGATGTCTTGACCGGAGA
GTGTGAAGAAGACAGGAGGGCGGAGGGAGAAGACGCAGTTCTGGCAAAGAGTGTGGCCGCACCATAAGACGTAAGGAACGTTCTCG
ACGATGTTGAATGATTCGAAGCAAATGGGACAGTCTAGTCCTTGTTCTTCCTCGTCTTCGTCGTCTCTGCTAACGTTAGAAACCTC
GTCGTCGTCGACGTCTGAGGGTTGAGGAGGAGGTGGGTGGTCTTTCTTTAGACCACCTATGCTGCCAATCACGTTTGACGCAAAGC
TCCACATTGGATCCGCAAAAATTGAGGATACAAACGTTCGTTACCCAGTTGAGAATTTTTGAGGAACAGTCATCATTTCAACAACC
TGGCCGTTTTAAATCTTCAAATGCAGATGCAGACGGTTCATCGAAGAAGTCTTGAGATCGAGACGAAGAAGAAAAGCCTCTCTCTC
TCTTTCTCTTTCTCTCTCCCTCGCTGTTCCGCCGTGATGCTTTTGTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888715 hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp. lyrata] | 858 | 1e-089 |
| CBI22278 unnamed protein product [Vitis vinifera] | 631 | 2e-063 |
| NP_564959 RING/U-box domain-containing protein [Arabidopsis thaliana] | 490 | 5e-047 |
| AAM65966 unknown [Arabidopsis thaliana] | 490 | 5e-047 |
| XP_002514704 ubiquitin-protein ligase, putative [Ricinus communis] | 419 | 8e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 136 | 2e-007 |
| O94317 Uncharacterized serine-rich protein C215.13 | 133 | 5e-007 |
| P32323 A-agglutinin anchorage subunit | 122 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9H5 Putative uncharacterized protein | 494 | 1e-047 |
| Q9C546 At1g69330/F10D13.3 | 494 | 1e-047 |
| B9RLT5 Ubiquitin-protein ligase, putative | 419 | 6e-039 |
| B9HXL6 Predicted protein | 407 | 1e-037 |
| Q8LBX0 Putative RING zinc finger protein | 355 | 1e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G69330.1 zinc finger (C3HC4-type RING finger) family protein | 861 | 2e-092 |
| AT3G29270.1 ubiquitin-protein ligase | 417 | 5e-041 |
| AT3G29270.2 ubiquitin-protein ligase | 417 | 5e-041 |
| AT1G74370.1 zinc finger (C3HC4-type RING finger) family protein | 355 | 8e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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