Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48200

FASTA Sequence
Unigene ID: UN48200Length: 579 SSR 
ACTTCACCTTCATTTAATTTAAGAGTATCAGAACATTGCTTGACCAACAAGCCACCAAAAAGAACCAAAAACAATCTGCAGAGAGA
AGCAAATTCATGCAAAGCTTCACATATTCTGCTAAACATCACATCTCTCATGAAGCTTTTGAGAGATTTTTTTATCAAAATTAAAA
AAAAAGAAATAAAAGGAGAGATCTTCACATATGAACATCACACCAAACAAGAACACTAGTACTTTTTCCCAAGAATTATACCGATG
ATAACGGAGATCAGAGCTACTCCAGAGACGATCTTCAGTGTCATGAGATGAGAAGTTGTAGCCGTCTGAGTAGCGGTTACGTCGCT
TGAAGAAGAAGAAGAAGAAGGAGATGCCTCTGACTTCTTCTTGCTCGTACGTTTCGTTGGAGATGAAAAGGACAAGTCAACGTCTC
GAGATTTAATAACTACATCCTTTGCCTCCGTTTCCTTAGCTTTAGCATCCGCGAGCTGCACTTTCTGTTCAAGATCTTTGACCATC
GATTCAAATTCAGTGACCGCCTTTTTCTTAGTTTCAATCTCTTCTTGTGATTGCTTAAGTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL09731 At2g32240/F22D22.1 [Arabidopsis thaliana]4586e-044
AAM15156 putative myosin heavy chain [Arabidopsis thaliana]4586e-044
NP_565741 uncharacterized protein [Arabidopsis thaliana]4586e-044
F84730 probable myosin heavy chain [imported] - Arabidopsis thaliana3001e-025
XP_002521050 Uro-adherence factor A precursor, putative [Ricinus communis]2822e-023

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8S8J6 Putative myosin heavy chain4584e-044
Q93ZJ6 At2g32240/F22D22.14584e-044
B9S4Y1 Uro-adherence factor A, putative2821e-023
C0Z3C2 AT1G05320 protein2802e-023
A5BUC9 Putative uncharacterized protein2622e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G32240.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 221693 Blast hits to 95553 proteins in 2574 species: Archae - 2848; Bacteria - 44259; Metazoa - 97474; Fungi - 15490; Plants - 8386; Viruses - 1229; Other Eukaryotes - 52007 (source: NCBI BLink).4592e-046
AT1G05320.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32240.1); Has 205658 Blast hits to 89336 proteins in 2499 species: Archae - 2336; Bacteria - 33619; Metazoa - 92986; Fungi - 14305; Plants - 7441; Viruses - 1151; Other Eukaryotes - 53820 (source: NCBI BLink).2811e-025
AT1G05320.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32240.1); Has 205658 Blast hits to 89336 proteins in 2499 species: Archae - 2336; Bacteria - 33619; Metazoa - 92986; Fungi - 14305; Plants - 7441; Viruses - 1151; Other Eukaryotes - 53820 (source: NCBI BLink).2811e-025
AT1G05320.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32240.1); Has 205658 Blast hits to 89336 proteins in 2499 species: Archae - 2336; Bacteria - 33619; Metazoa - 92986; Fungi - 14305; Plants - 7441; Viruses - 1151; Other Eukaryotes - 53820 (source: NCBI BLink).2811e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information