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Information for unigene UN48224
| FASTA Sequence |
| Unigene ID: UN48224 | Length: 901 |
SSR | | GCTACCTTTCACTTAGATATCTGGTAAAATTAGAGTCAAAAAGCAAATATCATACGAGTATACGACATGGACATGCCAACAACGAC
AGTGCTACTCAAGCTTAACAAGCTAATCGATTTTTAGCATTATAATGAGAGAACATTAGCCTGAAACATCTTCTTTGCAGAAAATA
ATATGAAAAGGACTCTCCAATTCGGTTACTCATCATCCTCTTCGCCAATGCCTTCGTTCTCATCATCTTCACCACTCCCACTCCCA
CTCCCAGCTTCTTCCATGCTATTGTCCTCATTCCCATTCTCTTCCATGCTGTTTTCCTCATTTCCGTCAGCTGCATCCTCCTCCTC
CTCCTCATCATCATCATTCCCATTCTCTTCGGTATTATCATCCTCATTCTCCTTCGTGTTGTCATCCTCAACATTCTTCTCCAAAT
CTCCCTCATCTCTTTTGCTTTTCGTCACGCCCTTTTGCGTTGATGCTTCTTCTTCATGTTTCCTCTTTTTCGTCTCTTTGGGCTTC
GAAGCTGCTGCTGCTCCACTACCACCACCACCACCAGCAGCAGCAGCCTTTTTCCCAGCGTTCTTCTTCTTAAAATCTTCAAGAGA
AGCTTTAAGCGGCCCCAAAAATTCTGAAAATTCCATGTCTTCTAATGCCTTAAACACATCCTCAGCTTTCATCGTCTGTCTTCTTG
AATCCTTACATACATCATTTGCTGTGGCGGAGAGGTAGTGGATGAAGATCCGGGCACTCTCGGAGAAAGCAAGCAGCGCTTCCTTG
TGAATGCTCACGTCATTATCCGGCGAACACTCCGAAAGCTTCTCTTTCACCACCCGCCGCACGATAGCTAGCGGCAGCTCGTCCAC
CACCGATTTCTCCGAATCCATCTTCTCTCTCTCTCGTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880919 hypothetical protein ARALYDRAFT_481647 [Arabidopsis lyrata subsp. lyrata] | 725 | 2e-074 |
| NP_180316 nuclear factor Y, subunit B11 [Arabidopsis thaliana] | 700 | 1e-071 |
| XP_002275482 PREDICTED: hypothetical protein [Vitis vinifera] | 414 | 2e-038 |
| ACU14526 unknown [Glycine max] | 412 | 3e-038 |
| XP_002312821 predicted protein [Populus trichocarpa] | 407 | 1e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JQ9 DNA polymerase epsilon subunit 3 | 157 | 6e-010 |
| P13816 Glutamic acid-rich protein | 152 | 2e-009 |
| Q7M732 Retrotransposon-like protein 1 | 145 | 1e-008 |
| A6ZU34 Putative DNA helicase INO80 | 137 | 1e-007 |
| Q08438 Protein VHS3 | 136 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZQH2 Putative CCAAT-binding transcription factor subunit | 700 | 1e-071 |
| C6SZ53 Putative uncharacterized protein | 412 | 2e-038 |
| A9PCR2 Predicted protein | 407 | 9e-038 |
| B9SCU4 DNA polymerase epsilon P17 subunit, putative | 371 | 1e-033 |
| D5ACV8 Putative uncharacterized protein | 342 | 3e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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