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Information for unigene UN48244
| FASTA Sequence |
| Unigene ID: UN48244 | Length: 973 |
SSR | | CCTTGCAAGAAACCATTCAAAAAACTTATTCATGTAGGTTAACAAATGTTACAAACCAGATCAACTATTGATCTCTCAGAACATTC
TTGACTGTAATTCAAAAGCCCCAAAACACCAACAAATCAACTCAAAGAGTGACAGAAAAGAGTGCACTCACTCACTCACTCACTGG
AATTTATTCTTCTGTACACTAATTGAGGAAAAGAGGAGAGAGAAGCTTGAGGAGACGTCTTACTCTACTCTCTCACCTCTCCAGAC
AACGTTCCCTCCTCTTCTTCCCCATCGAACTCTTGTTCTACACCTTTCACCTCGGGTACATAATGCATGAGCATGTTTTCTATTCC
AGATTTTAATGTAACAGATGAGCTTGGACAACCGCTACAAGGTCCTTGCATCCTCAGCTTCACTATTCCGCTTTCAGGATCAAACC
CACAATACTCAATGTCCCCACCATCATCTTGGACTGCTGGTCTGATGCGTGTTTCCAAAAGTTCCTTGATCATTGCCACGGTTTCA
GTGTCATCCTCGTTAATAGCAGTATCCTTGGCAGCAGCAGCTTGCGAGTCCAGAAACAGAGGCTGACCAGAAGAGTAGAAATATGA
CAGCTGCAAATATCTCAGGCTTGAGTATATCCCATGATACATCATCTGACTTTGTCACAGTGACGAAATCAGACCCAAAGAAAACT
CGAACCACACCATCGATGGAGTAAATGGACTTGGCCAATGAAGAATTTAAAGCTGAACGAACGTTAGGAAAATCAGCACTTCCAAC
CTCCATGACTGGCTTTCCAGGATAAAACATGAGAGAAGAAGGATTCGGAGTTGATTGCGTTTGTATAAACATGGTCCTTCTCTGCC
CTCCGAGAAAAGCCCATTTCTGAGGAAGTGAAGAAGATCTCAAAGAGGAGGAGGAGGTTAGATCAGGTGAATTGGTCGGAAAGTGC
GTAGCCGCCGAGATGAAGAAGAGTGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566673 NifU-like protein 4 [Arabidopsis thaliana] | 580 | 1e-057 |
| NP_175550 NifU-like protein 5 [Arabidopsis thaliana] | 531 | 6e-052 |
| AAD30650 Similar to human CGI-33 protein [Arabidopsis thaliana] | 531 | 6e-052 |
| XP_002891637 hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp. lyrata] | 531 | 6e-052 |
| XP_002264979 PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera] | 514 | 6e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LIG6 NifU-like protein 4, mitochondrial | 580 | 6e-059 |
| Q9C8J2 NifU-like protein 5, mitochondrial | 531 | 3e-053 |
| B3NYF7 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 328 | 1e-029 |
| B4IMF6 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 328 | 1e-029 |
| B4R3T1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 328 | 1e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HVY4 Predicted protein | 512 | 7e-050 |
| A9NNH0 Putative uncharacterized protein | 509 | 2e-049 |
| B9SG71 HIRA-interacting protein, putative | 509 | 2e-049 |
| C5Z0J5 Putative uncharacterized protein Sb09g004310 | 509 | 2e-049 |
| B4FCD0 Putative uncharacterized protein | 504 | 6e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20970.1 NFU4; structural molecule | 580 | 5e-060 |
| AT1G51390.1 NFU5; ATP binding / structural molecule | 531 | 2e-054 |
| AT3G20970.2 NFU4; structural molecule | 491 | 1e-049 |
| AT5G49940.1 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 151 | 3e-010 |
| AT5G49940.2 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 151 | 3e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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