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Information for unigene UN48277
| FASTA Sequence |
| Unigene ID: UN48277 | Length: 871 |
SSR | | AGTATAAACAGAAGCTCATATAAGAATATGCTGTTACAAATTCTACTACAACTTGCCCAATTTTAAATATCCTTCCGACCGTAGAC
ACTAGTTATTACAGACATCAACACATGAACCAATCCTAAAACAGACAACGAGCCTCTCATCCTCACCACCATCTTCTTCCCTTCCT
CTTGTTCCACCTTCCTACTTCCACCGCTTCCCATTGAAAACCCTGTGTGCAAATCACTTGTCTCGAGATAGATACCCAACCTTTTC
GTAGCTTGGAATCCAAGTCTCCCACTTCTTCTTCTTCTTCCTCTTCTCACACTTTCTCTCTCCTCGCCTTGATTCTTCACGGGAGG
AGTTTCTTGTTGCTCCAGACTTTCCTGACTCTCTTCGTCCCAGAGGATTTCAGGGTACGATTCCAGTAAACGCCTTTTCTTCTCCT
CCAAATCATCATCATCAAGTGACTGAGAAGCATGTCCTTGGTTATTAGAACCAAGAAGCAACATATTCCACAAGGAACAGAACAAT
GTGAAAGAGCGAAGCTGCGAGGAGTCAAACGCATCCGGCTTTTCTACAAGGGTGTTCTCCTTTAGCAAAGAACCGGATTTGCACCG
GATCTTAACCGAACAACACAAGATCAGAAGGTTCAGTCTCCAGTCCTGACAAGTAGACTCGCAGGTTTTGTTTCCACTCATGTTGT
TCTCTGCCAAAACAATTCCAGGCATCTTTCTCTGCTCTACACAGCTCAACTCTGGAACCGCTTCTCTGATCGACTGATGCATAAGA
GAAGATCTCTGAGCAGTGTAGCTTGATGAATCTTCTGGGACATCAGAAGCTGCGTGAGTTAGGACCACGATAGCGTTTCGCCATAT
TGATGAGCCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868178 hypothetical protein ARALYDRAFT_355185 [Arabidopsis lyrata subsp. lyrata] | 879 | 2e-092 |
| NP_193316 GTP binding protein [Arabidopsis thaliana] | 625 | 6e-063 |
| CAB10358 OEP8 like protein [Arabidopsis thaliana] | 420 | 4e-039 |
| XP_002531885 protein translocase, putative [Ricinus communis] | 188 | 3e-012 |
| XP_002874910 TOC159 [Arabidopsis lyrata subsp. lyrata] | 165 | 1e-009 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81283 Translocase of chloroplast 159, chloroplastic | 163 | 1e-010 |
| Q9SLF3 Translocase of chloroplast 132, chloroplastic | 142 | 3e-008 |
| Q9LUS2 Translocase of chloroplast 120, chloroplastic | 140 | 5e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23431 OEP8 like protein | 420 | 3e-039 |
| B9T0W6 Protein translocase, putative | 188 | 2e-012 |
| B9HXV1 Predicted protein | 165 | 1e-009 |
| C5Z063 Putative uncharacterized protein Sb09g004020 | 163 | 2e-009 |
| B8AY53 Putative uncharacterized protein | 160 | 4e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G15810.1 GTP binding | 625 | 3e-065 |
| AT4G02510.1 TOC159 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159); transmembrane receptor | 163 | 1e-011 |
| AT2G16640.1 TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132); transmembrane receptor | 142 | 3e-009 |
| AT3G16620.1 ATTOC120; GTP binding | 140 | 5e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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