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Information for unigene UN48353
| FASTA Sequence |
| Unigene ID: UN48353 | Length: 1106 |
SSR | | CATGTCGTAATCATAATCATTAGCTTCTTCAACCGAAGCTTAATCAACTAGATTAACTACAAGGCTTTGTTTATTCATTTTACATT
TCCAAAACTGTTTGCAAGACAATTGTTTATATATTTATTGTTACGGAGAGGAATCTTGCGTCGGGAACAACTTGCTATACTCCGGT
CTACTTCTACTACTCAACATCCTCATCAACGAACTCGATGCTGATGACGCCACCGAAAACGTTGATTTCCGATCACCTCTTGATCC
TATCTCCTCATCCAACACTTCAATTCTAACCTCTCCTTCCACGTCAACCCCTGTTTTGAGATTATCTTCCATCACAGTAAGCGACA
GTGAAAATCTCCGATCATCATCATCGGCAGCGGCGTCGTTTTCTTCTCCTCCGGGTGGAAACAGTTGTAGTCTAACCTCTGCTTCT
TCTTCTTCTTCTACGCCATTAATGGCCGGCGGCTTGAGGTTGTCTTGAACTGAAGCTGGGAGAACAGGGGATCTACAGAGAGGACA
AGTAGAGTGACAAGACAGCCACATGTCTATACACTCAACGTGAAACGCATGTCCGCAATTTCTCAGCTTTCTTCCGACATCTCCCG
CTTCCCACAAACCAAGACATATCACACACTCCTCTTCTTCTTCGTCTTCTTTCTCGTCGTCTTCGTACACGAACAGAGGAATCGAA
GAAATCACTGAAGAATCCAAACCTTTGTCATCGCTTGTTGCAGCAGCAGCAGCAGCAGAAGGAGAAACTCCACCGTCTAAACCTCC
TAGTGGAACTGAAGGTATGAGTCTTGTAACGGTTCTTCTTCTTCTTCTTCTAAGGCGGCGTCGAGCTGAGGAGAATTCTTGGTCGG
AGTGTGACCAGAAATAGCGGGCGTAGAAATGGAGAAGCAAGACGAAGAGGACGACTAATAGAAGGAAGACGAGAGCAGCCAAGAGG
ACATTGGAGTTGTAAGAAGATAAGACTCTGAGGAAACTCGAGAGACTGCTTCTCCTACTCATTGATCCTTCTTCTTCTCCTTCTTC
TTCTACTCTCATTGTGTTTATGACTTCGGAGAGAGCTTTTATTTTTATTTTTTTCTTGGATCAACGTGATTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866275 hypothetical protein ARALYDRAFT_495981 [Arabidopsis lyrata subsp. lyrata] | 1028 | 2e-109 |
| NP_200666 RING-H2 finger protein ATL63 [Arabidopsis thaliana] | 979 | 9e-104 |
| XP_002521616 RING-H2 finger protein ATL3F, putative [Ricinus communis] | 269 | 2e-021 |
| XP_002278655 PREDICTED: hypothetical protein [Vitis vinifera] | 261 | 2e-020 |
| XP_002519430 RING-H2 finger protein ATL3C, putative [Ricinus communis] | 222 | 5e-016 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LUZ9 RING-H2 finger protein ATL5O | 979 | 4e-105 |
| Q8L9T5 RING-H2 finger protein ATL3F | 234 | 9e-019 |
| Q9LZJ6 RING-H2 finger protein ATL3L | 234 | 9e-019 |
| Q9SJJ7 RING-H2 finger protein ATL2E | 233 | 1e-018 |
| O22255 RING-H2 finger protein ATL2N | 232 | 2e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S6J7 RING-H2 finger protein ATL3F, putative | 269 | 1e-021 |
| B9HXR4 Predicted protein (Fragment) | 232 | 2e-017 |
| A3A822 Putative uncharacterized protein | 229 | 6e-017 |
| Q0E0C5 Os02g0559800 protein | 229 | 6e-017 |
| B9S0B1 RING-H2 finger protein ATL3C, putative | 222 | 4e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58580.1 ATL63 (ARABIDOPSIS TÓXICOS EN LEVADURA); protein binding / zinc ion binding | 979 | 3e-106 |
| AT3G16720.1 ATL2; protein binding / zinc ion binding | 234 | 8e-020 |
| AT3G62690.1 ATL5 (ATL5); protein binding / zinc ion binding | 234 | 8e-020 |
| AT2G27940.1 zinc finger (C3HC4-type RING finger) family protein | 233 | 1e-019 |
| AT2G47560.1 zinc finger (C3HC4-type RING finger) family protein | 232 | 1e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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