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Information for unigene UN48360

FASTA Sequence
Unigene ID: UN48360Length: 1120 SSR 
GAGAGTCAAGACTTTTACAAAGGGAGTGAAAGTTTCACGTAGTTAATAGGGATTCTCTTTAATCATTTTCAAGACCAGTTGATCTG
AGCTAACCAGTATCACAACCTAGCTGGGTTCAAAACACACCAAAGCTACACTTAAAGACGAGACAAATCATACATGCATTACGCAT
ACCCATTTTCTAGTCCTTCATCAGCACCAGCCACGCCTTCTCTAGCTACTGAATTAACAAGCGTTATCAATAATGCTTCAATCAAG
TGAGCACAATTAAGTAATTCTGCAAAAAAACAAAGCGTTTGCAGGAGCTAAAAAAACTTTGCCAAGCGTCTCGGGATCAGCAAAAC
AATCCAGGTAGTCATCCTGCACTTGGAAGTAGATTCCCATGTCAACGAGGACATTCTTCACATCAACATGGTTCTCCAAATCCTAG
CCAGCCATCAACAATGCACAAGCAACAGGGAGATAAAATGAGTAATAAGCCGTTTTGTACTGGACAATACGCCGGTGGATTGGCAA
GGAGTACTTGGCCAAATCCTTTTCTCCTTCAAAGGTGGTGATCAGATCTATCATCTGGCCGCAAGCTGTTTGAAATTCTCGTTAAA
GAGATCAACGAGGTCAACATAGAAAGGCTTTCCCCGGAAGTGCTTTTTGAGAATCCTGTGGATGTGATTGCGAAGTAGAGTCCCGT
CATTAATGGCAACCATACCAACCTGAGGGACTCTGAACCAGCAAGGCTGGCCACGGCGAGTGACAGAGTTATCCATAATGTCATCA
AGCACAAGGAAATAAGCTTGAAGCCATTCGATACACCAACCGAGAGCACAAGAGAGAAAAATCTCTTCCTCTGTCAAGTCTTTACC
TTCCTTCAAAGGCTTGAAGCTGTCCACAACAGAGAGACCCCGGTTGAGCTTCCCTCCAGGTACGTTGTAATCAAGCATCTTTTCGA
CCCAGAGACGAGACTCATCGGTGAATTCGAAGGAAGGGTCATGAAGGAGGTCAGACTTGAGGGTTGAATAAACGTTGAGGAAGGTT
GACTTTAGCTCCGCCATTAATAGATGATGATGATGATGGGAAGAAGATGAAAGTTGCCTACTTTGACAGAGACTAACAGCGCCCAC
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863368 farnesyl diphosphate synthase short form [Arabidopsis lyrata subsp. lyrata]7602e-078
NP_199588 farnesyl diphosphate synthase 1 [Arabidopsis thaliana]7423e-076
CAA53433 dimethylallyltransferase [Arabidopsis thaliana]7396e-076
AAB07264 farnesyl diphosphate synthase short form [Arabidopsis thaliana]7396e-076
NP_193452 farnesyl diphosphate synthase 2 [Arabidopsis thaliana]7021e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q09152 Farnesyl pyrophosphate synthase 1, mitochondrial7421e-077
Q43315 Farnesyl pyrophosphate synthase 27025e-073
P49351 Farnesyl pyrophosphate synthase 16712e-069
P49352 Farnesyl pyrophosphate synthase 26622e-068
P49350 Farnesyl pyrophosphate synthase6433e-066

TrEMBL top hits (Blast detail)Scoree value
Q94IE8 Putative FPP synthase 26883e-070
C6THU1 Putative uncharacterized protein6785e-069
O04838 Farnesyl pyrophosphate synthase6785e-069
Q4JHN6 Farnesyl diphosphate synthase6732e-068
Q4TTY7 Farnesyl pyrophosphate synthase6732e-068

Arabidopsis top hits (Blast detail)Scoree value
AT5G47770.1 FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase7421e-078
AT4G17190.1 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase7024e-074
AT4G17190.2 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase4552e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information