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Information for unigene UN48400

FASTA Sequence
Unigene ID: UN48400Length: 943 SSR 
CGGTGCAAAATTAAATGACAACTTTTTAAGTAGATAAAATTAAGGACTCTAAATTAATAGAGTAGATGTATAAACAAAACGGTGAC
CGTTCTTCATCTTCATCCTCCCTCCCTCTCTCTCAGGAAAAGATGAAAAAAAAGAAAACACTAAATAGATATCACATATTCATTTG
CTTCAAAAATGTAGTAGTAACACTAGTAATCAAATCTTTCTCTCTCTCTGTTAGGGCCTTGGTCCGGAATCTCTCTCTATATACAC
TTGTTTTTTTTGTTGGCTTTGGTCTACTAAGCCACGGCGGGGATGCTGGAGCTCTGGCGGTCACGGTTCAAGCAATCGAACCCTTC
TACTCTAACTGCAGGTGGTTTGAGCCCAAATTTCATTCGAGCGCAACCACGAGACGACGACGAAGACGATGTTGATGGTGATGGAT
AAGGGAAGCCGGCTGATGATGATGAACCGGGCTGAAGGAAAGGAGAGTTGGGTGAAGCGAGTGGGTAGTTGAGCTTCTCGCCGTCA
CGAAAGCGTGCATCTTGGGCTAATGGGTTCGCTGCTCTGCTCGGAGGCGAACCGGGAAAGTACGGTGGAGATGAAGGTAGTAGTAC
CTGCCCTATTGTACCATTCTCCTCCTTTCTACGGATGATGTCCAAAAGCTCTGCGCCCGCTTTGGAATCACACAGATCAGCAGCAG
CTTGACTCAAATGTAATCTAAGAGGGCGAGTGGCGAGTAAGCCGACACGTCTAGGCTTAGGACAAACGACAAGATCCTCCTTGTTG
CTGCGATCAAGTCCCATCATCTCCTCCTCGCGAGACATGAAGGCGTTGTTCTTCTGCTGAAGGTTGTATTGATTCATCTTTGATCA
ACGCCCTGAGTAAAATCTCCGAGAGAGGGGAGAGAGAGAACGATGACAGACAAGATTTTTGTGTGAGAGAGAGAGAGAGGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568326 uncharacterized protein [Arabidopsis thaliana]6964e-071
BAF02167 hypothetical protein [Arabidopsis thaliana]6964e-071
AAG40362 AT5g16110 [Arabidopsis thaliana]6742e-068
XP_002873758 AT5g16110 [Arabidopsis lyrata subsp. lyrata]6723e-068
XP_002329333 predicted protein [Populus trichocarpa]3873e-035

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WL40 Putative uncharacterized protein At5g161106963e-071
Q9LF17 Putative uncharacterized protein T21H19_306963e-071
Q9FPI4 AT5g161106741e-068
B9N232 Predicted protein3872e-035
B9S5F6 Putative uncharacterized protein2626e-021

Arabidopsis top hits (Blast detail)Scoree value
AT5G16110.1 unknown protein6971e-073
AT3G02555.1 unknown protein2732e-024
AT1G13390.1 unknown protein2212e-018
AT1G13390.2 unknown protein2212e-018
AT1G68490.1 unknown protein1997e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information