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Information for unigene UN48405
| FASTA Sequence |
| Unigene ID: UN48405 | Length: 980 |
SSR | | CGATGATGAAAGTCTCATTTTATTTGTTCAACAAATTTTACACCACAATATATAGTAAAGAACACAAAGTTTTCTCCCACTTACAC
TTTTGTTTATTTGTTTTTTTTTTCCTAACCAAGATCGAGGGCATAATTGTAGTAGGCTACACATACATTAGTACAAAAGGTAAACA
CGTTCTTAGTCTTGCTTGCGAGAATTGGCCTTCGCTTTATTCTGTTTAGCACAATATTCAAATAAACTTCCATCAAAGCAACCTCT
CACAGCTTCTTTAGACACGAACCCTTCATCATCCTTTGCAAGAAGATAAAGTAGTAGCCATTCAACTTTGTTCGAAACCCACCCAA
AAGGATCGATTGCCATTCGGTTTCCCTCGGTTAAGTTCCAAAGCTCTTTAAATGATAACTTATCCGAAACTGTTAAAGCGTATTTG
CTAAATATGTTCTCGAGATTAGCCGGTACAAACCTTCCTTCGGTATCATAGGTGCTTGAATCACTCCCATGCTTAGCTTTGTGTAT
GTTGTCGATATAAACAGGTAATAGTGGTGATGGCAACCAACTCGGAAGTGTAACATAGCTAAACGCTAAGTTTACGATTAAGCTCC
AAAATATACAGGCGATTGGGTTGAAACCAAGGTCACGGAGTCCTGCATAAGTCTCCCAAGGATAGACGATTCCGTCGCCGTTTTGG
TCGAAGAAAGCAACATGTTGTTGCATAACACTCATGCCTTTGCTGTCATGACCTTCTGTTCCATTCGGATGCTCTGTATCTGGAGC
TGCTAATGCTCTAGCCAAATATGGTTTAGGTAATGTGTCCTCCAAATCGTTCCGTACTTTTCGCTGACCGGTCACCGGAGCTAAAG
GCGCCGTCGTGGCAAAAGCCTCTGACTCTTCTCCCATACTCTCTCTCTCTCTCTTCGGTAAGTGTTAATAATTGAAGATGCTCTCA
GTTCCTTCTTTTTGCAAAAGATGTAACAGTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACG69527 caleosin CLO3-1 [Brassica napus] | 1160 | 7e-125 |
| ACG69528 caleosin CLO3-2 [Brassica napus] | 1152 | 6e-124 |
| XP_002881279 hypothetical protein ARALYDRAFT_482279 [Arabidopsis lyrata subsp. lyrata] | 1143 | 7e-123 |
| NP_180896 caleosin-related protein [Arabidopsis thaliana] | 1103 | 3e-118 |
| ABX10750 RD20 [Brassica juncea] | 1101 | 5e-118 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C3S7H2 Caleosin CLO3-1 | 1160 | 5e-125 |
| C3S7H3 Caleosin CLO3-2 | 1152 | 4e-124 |
| O22788 Putative Ca2+-binding EF-hand protein | 1103 | 2e-118 |
| A9LLF1 RD20 | 1101 | 3e-118 |
| B9SQU8 Calcium ion binding protein, putative | 872 | 1e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G33380.1 RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | 1108 | 3e-121 |
| AT4G26740.1 ATS1 (ARABIDOPSIS THALIANA SEED GENE 1); calcium ion binding | 827 | 1e-088 |
| AT5G55240.1 caleosin-related family protein / embryo-specific protein, putative | 801 | 1e-085 |
| AT2G33380.2 RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding | 709 | 6e-075 |
| AT5G29560.1 calcium ion binding | 589 | 5e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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