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Information for unigene UN48411
| FASTA Sequence |
| Unigene ID: UN48411 | Length: 1290 |
SSR | | AATCATAAACCATATTGATGTGTAATTCTATTCGATTTCATGGTCCATGAACAGCGTGAAGAAATCAGAGCATTTGACAAAGAGGG
AAACGGAAAGAAAGACAAAAGTGAATAATAGTTTCAGCATATGGTAAGAATCTCAAAACCAGTTCTAGTAATCAGAATTGTATGCT
CACACTGTGCGGCTACCCCACCATCCGCCGTTAGAGTGGTCCAGTTGTCTGGCCATGTTACACAGTCCGTGGTTCCAATCGTTAGA
ATCGGTTCGATTGTGAATGTTTGTCCCTCAACCATTTGGCCAGGCTCATCATTTCGGTAATGATAAATCAAGGGTTCAGAGTGGAA
TACTGGTCCAACACCATGCCCAACAAAGCGCTCCACCACGTTGTAGCCATACTTTTCGGCATGCTCACTTATTCTCTTGCCGATTT
TCTTGAAGCTTGCTCCATCTTTACAAACGGCTATCCCTCTCTCTAAGCATTCCTCCGTAATCTGTACAAGTCGTTTAAAACCTTCA
TTTACTTCTCCACAGAAAAAAGTTCTTGATGTATCTCCATGGTAACCCCAAGTAAACCGTGACATCGATGTTTATTATATCTCCAT
TCTGTAGCTGACGAGAATCCGGTATCCCGTGGCACATACACTCGTTAACCGATGTGCACACACTTTTAGGAAATCCACCATACCCA
AGAGGCGAAGGATAAGCACCAGCTTCGATGATCATATCATGCACCGCTTTGTCTATCTCATTAGTCGTCACAGAAGGTTTAACCAA
AGTTCCTGCAAAGTTTAGCACCCGAGCAGCGAGCTCGCAAGCAGCTCTCATCTTCGCAATACCTTCAGGACCAGGAATCTGGAACT
CGGGAGATATATAAGGTAACATGCCAGACTCAACGTAAGGAGGCCTTGGTATGTGGTCAGGGACGAGAAGACGAGGCGATACTCTT
CCACGTCGTAACGGTGGATTTCTCCTAACTTTTGAAGTTTTTTCCAGCTCTCTCATCCTTCTGATTCTAATGGCTTCTTCTAATCC
AGAGACTTTCTTAGCAGAAACGTGAAGTTTTCTCGGAGGATACGAGTTCTTCTGACCGGAGAGCAGTGATGGAGAAGAAGAAGTGA
GCGGAGCTGCTGCTCCGATGAAGCTCCTGGAAGATGATACATACTCGCCGTTGAAAGAAGAACGGAGTTGTAACGACGACGACGAC
GACGACGATGGCGAGAAACTGGATAGAAAAACCGTAGACGCCATCTTCGCAACCTCACTGCTAAACGGACTCTGAGAAATATCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAG33975 methionine aminopeptidase-like protein [Arabidopsis thaliana] | 960 | 2e-101 |
| NP_172785 methionine aminopeptidase 1B [Arabidopsis thaliana] | 958 | 3e-101 |
| NP_973815 methionine aminopeptidase 1B [Arabidopsis thaliana] | 958 | 3e-101 |
| XP_002889997 hypothetical protein ARALYDRAFT_471483 [Arabidopsis lyrata subsp. lyrata] | 947 | 6e-100 |
| XP_002278748 PREDICTED: hypothetical protein [Vitis vinifera] | 721 | 9e-074 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FV52 Methionine aminopeptidase 1B, chloroplastic | 958 | 1e-102 |
| Q9FV51 Methionine aminopeptidase 1C, chloroplastic/mitochondrial | 568 | 2e-057 |
| Q9FV50 Methionine aminopeptidase 1D, chloroplastic/mitochondrial | 482 | 2e-047 |
| Q54VU7 Methionine aminopeptidase 1D, mitochondrial | 387 | 2e-036 |
| Q6UB28 Methionine aminopeptidase 1D, mitochondrial | 356 | 8e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3EDD4 Methionine aminopeptidase | 958 | 2e-101 |
| C6TDS0 Methionine aminopeptidase | 705 | 4e-072 |
| A9PHH4 Methionine aminopeptidase | 689 | 3e-070 |
| B9SEJ2 Methionine aminopeptidase | 670 | 5e-068 |
| B9HIZ3 Methionine aminopeptidase | 667 | 1e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13270.2 MAP1C (METHIONINE AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase | 964 | 2e-104 |
| AT1G13270.1 MAP1C (METHIONINE AMINOPEPTIDASE 1B); aminopeptidase/ metalloexopeptidase | 964 | 2e-104 |
| AT3G25740.1 MAP1B (METHIONINE AMINOPEPTIDASE 1C); aminopeptidase/ metalloexopeptidase | 568 | 2e-058 |
| AT4G37040.1 MAP1D (METHIONINE AMINOPEPTIDASE 1D); aminopeptidase/ metalloexopeptidase | 482 | 2e-048 |
| AT2G45240.1 MAP1A (METHIONINE AMINOPEPTIDASE 1A); aminopeptidase/ metalloexopeptidase | 383 | 5e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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