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Information for unigene UN48471

FASTA Sequence
Unigene ID: UN48471Length: 804 SSR 
GTCTGCTCATAATGTTCCAGTTATAAAAGAGAGATTACAAATTTTGCAAGGGGGAATGTCTTTGTTTTACAAATAGTCTTGCATTA
GGCAAAGAAGAGGAACAAGCAAATACACACACGATGCTTCACACAGTTCACAAAAAGAAAGCAAACTAATAATAGCACAAAGCTAG
ATTTTTAAGAGTGACTGGATCAGCTTCTGGACTTGAATGGGATGGCTCTGATGACTATCACGTGGTACAGAGCAGCAAGAGCAGCA
CCGATGAATGGTCCAACCCAAAAGACCCAATGGTCGTCCCAAGCGTTATCCTTAGGCCTAACGTACAAAACGCCGTCGTCTTGACG
GAACTCACACATCCCAACATTTCCTCTTTTCTCCCACAGTCTCTCACCGAACCTACGGTGAGCAAAGTACACCTCCGCCAAAACGA
CCCCGTTGGACTCCTCCTCAACCACTTCCACTGGCAACCTCTCGTAGTGCTCGACTTTGATCCCTTCCAGCTCGTCAAGCCTCACG
AGCCCGCTTTCTGAAACCGCGTAAAGCTCGCCGCGGATCCGTTGACCCGACCCGGATCTGTTGATCAAGTAAGGGATCCCGTAAAG
GCCCGTGACGAGCGGGAACGGTAACCGGGTCGTGCGTTAGCCGACGTAAACGGCGTCGTTCTTGGAGATGAGGTCTTCTATGAGGA
AATGGTTTGGATGGTTTCTTTTCAGCGTTCCGTACACGAAGATGTGGTTCGCGAGTGCTCCTCCTCCTCCTCCTCCTCCCATGGTT
TGGCGCGACGCGAGGCTCGGGCTTGAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199484 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana]6292e-063
XP_002865167 hypothetical protein ARALYDRAFT_916756 [Arabidopsis lyrata subsp. lyrata]6131e-061
XP_002270495 PREDICTED: similar to Os03g0854000 [Vitis vinifera]3452e-030
XP_002271171 PREDICTED: similar to Os03g0854000 [Vitis vinifera]3352e-029
NP_001051934 Os03g0854000 [Oryza sativa Japonica Group]3192e-027

Swiss-Prot top hits (Blast detail)Scoree value
Q9M8T3 Putative gamma-glutamylcyclotransferase At3g029102534e-021
Q06611 Aquaporin PIP1-22184e-017
P61837 Aquaporin PIP1-12103e-016
P61838 Aquaporin PIP1.12103e-016
Q08733 Aquaporin PIP1-32051e-015

TrEMBL top hits (Blast detail)Scoree value
Q9FIQ3 Genomic DNA, chromosome 5, P1 clone:MZA156291e-063
A2XP74 Putative uncharacterized protein3191e-027
Q84T74 Expressed protein3191e-027
C4PEU0 At3g02910-like protein (Fragment)2714e-022
A9RS78 Predicted protein2591e-020

Arabidopsis top hits (Blast detail)Scoree value
AT5G46720.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02910.1); Has 249 Blast hits to 249 proteins in 85 species: Archae - 5; Bacteria - 65; Metazoa - 121; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).6298e-066
AT3G02910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46720.1); Has 210 Blast hits to 210 proteins in 66 species: Archae - 2; Bacteria - 27; Metazoa - 122; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).2533e-022
AT2G45960.1 PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel2193e-018
AT3G61430.1 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel2112e-017
AT3G61430.2 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel2112e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information