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Information for unigene UN48480
| FASTA Sequence |
| Unigene ID: UN48480 | Length: 675 |
SSR | | GGAACAATTAAAAAAACACAACTCAAAAGACTTCGATCATCTTCAAGGTATGTTCTAACTTCTCGTGTAATGATTTACTGAAGTCT
GTTCTGTTCTTGATTTGTTTATGAATTATGATCTAATTAGCTATTATTTCCGCAGAGAGAATCGAACCAAGTTTACATGGTTGAGC
TAGACATCCAAGTTCCATCAGCATTCGACCCGTTCGCAGAAGCTCAAGAATCAGATGCACCAGGGACAAAAGAGTACATCCACGTC
CGGATCCAGCAGAGGAATGGGAAAAAGAGCTTGACGACTGTTCAGGGTCTGAAGAAAGCGTACAGCTACGAGAAGATTCTCAAGGA
TCTTAAGAAGGACTTCTGCTGCAACGGGAACGTGGTGCAGGACAAGGAGCTAGGAAAGATCATTCAGCTTCAGGGTGATCAGAGGA
AGAAGGTGTCTCACTTCTTGGTTCAGACTGGGATTGCTAAGAAGGAGCAGATCAAGATCCACGGGTTCTAAAGACCCGCGATTCGA
ATTGGATCGTGTGATATCTTTCTGTCTATTTATATATATATATGCGAATAATTGGACGTGGTGTTTGTGATCACTAGGAAGGTTTT
TTTTTCTCGTTTTGATTGTTGTTTGTTGGTGTGGGACATTTGAGTTGTGGAATGATGATAAACCACCTTTCGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34327 unnamed protein product [Thellungiella halophila] | 542 | 2e-053 |
| XP_002866067 hypothetical protein ARALYDRAFT_918633 [Arabidopsis lyrata subsp. lyrata] | 534 | 1e-052 |
| NP_568818 Translation initiation factor SUI1 family protein [Arabidopsis thaliana] | 531 | 3e-052 |
| XP_002280080 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 518 | 1e-050 |
| ACJ85979 unknown [Medicago truncatula] | 513 | 4e-050 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P56330 Protein translation factor SUI1 homolog | 454 | 1e-044 |
| A6MZM2 Protein translation factor SUI1 homolog | 454 | 1e-044 |
| Q0D5W6 Protein translation factor SUI1 homolog | 454 | 1e-044 |
| Q9SM41 Protein translation factor SUI1 homolog | 451 | 3e-044 |
| P41568 Protein translation factor SUI1 homolog 1 | 449 | 5e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFT6 AT5g54940/MBG8_21 | 531 | 2e-052 |
| B7FMJ6 Putative uncharacterized protein | 513 | 3e-050 |
| C9VXS6 SUI1 B protein | 466 | 8e-045 |
| B4FLV6 Protein translation factor SUI1 | 461 | 3e-044 |
| C5Z0D7 Putative uncharacterized protein Sb09g024530 | 461 | 3e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54940.1 eukaryotic translation initiation factor SUI1, putative | 532 | 1e-054 |
| AT5G54940.2 eukaryotic translation initiation factor SUI1, putative | 532 | 1e-054 |
| AT4G27130.1 eukaryotic translation initiation factor SUI1, putative | 450 | 4e-045 |
| AT1G54290.1 eukaryotic translation initiation factor SUI1, putative | 449 | 5e-045 |
| AT5G54760.1 eukaryotic translation initiation factor SUI1, putative | 449 | 5e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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