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Information for unigene UN48497
| FASTA Sequence |
| Unigene ID: UN48497 | Length: 638 |
SSR | | GGAGCTTTGCTTGTTTCGCTGTCGGAACGAGAAAATAAAAGCTTAGGGTTCAATCTCCCTCACTCGCCATGTCCGGAGAAGAAGAA
GAAGAGAACGCCGCCGAGCTCAAGATCGGAGACGAGTTTTTGAAGGCAAAGTGTTTAATGAACTGTGAGGTCTCATTGATCCTTGA
GCACAAGTATGAACAGCTTCAGCAGGTCTCCGAGGATCCTATGAATCAAGTTTCTCAAGTGTTTGAGAAGTCCTTGCAGTATGTGA
AGCGGTTTAGCCGGTACAAGAATCCAGATGCTGTTAGACAAGTTCGAGAAATCCTGAGTAGACATCAACTCACTGAGTTTGAGCTC
TGTGTTCTTGGCAATCTCTGTCCTGAAACTGCTGAAGAAGCAGTGGCTATGGTTCCTTCTCTCAAGACAAAAGGAAGAGCTCATAG
TGATGAAGCAATTGAGAAGATGCTCAATGATCTCTCCCTTGTCAAAAGATTCGAGTAGTGCAAAACATTCTCAAGATCTTACATAT
TATAAACATAAATCTTTTTAGCTGATGATGTCTGGAGTTGATTTTTCATGTCTGCCTTCAATGTTAAATGAATGTAATTTGCAATG
GGATGATCCCAAGCTTGCAATGATATATGAATTATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871392 RPB15.9 [Arabidopsis lyrata subsp. lyrata] | 672 | 1e-068 |
| NP_196554 DNA-directed RNA polymerase II subunit D [Arabidopsis thaliana] | 671 | 2e-068 |
| XP_002307132 predicted protein [Populus trichocarpa] | 646 | 1e-065 |
| XP_002282413 PREDICTED: hypothetical protein [Vitis vinifera] | 643 | 3e-065 |
| XP_002522014 DNA-directed RNA polymerase II, putative [Ricinus communis] | 636 | 2e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 256 | 1e-021 |
| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 256 | 1e-021 |
| Q9VEA5 DNA-directed RNA polymerase II 16 kDa polypeptide | 224 | 5e-018 |
| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 191 | 4e-014 |
| O74825 DNA-directed RNA polymerase II subunit rpb4 | 160 | 1e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O48890 15.9 kDa subunit of RNA polymerase II | 671 | 1e-068 |
| B9H5K4 Predicted protein | 646 | 9e-066 |
| A5APH2 Putative uncharacterized protein | 643 | 2e-065 |
| B9S7P5 DNA-directed RNA polymerase II, putative | 636 | 1e-064 |
| C6SV83 Putative uncharacterized protein | 632 | 4e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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