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Information for unigene UN48507

FASTA Sequence
Unigene ID: UN48507Length: 1000 SSR 
GGACTTCCACTCTCTCTCTCTCCATCTCCTTCCATTGTTCTTCCCCTTCTCTTCTCTCTCTCTCTTTCCCGTACTTCTAGGGTTTC
GTTTGATCACATCTCCGTTCATCTCAATTCATCTTTTTTTATAAAAAAAAATCCTGTAAGAAGCAGAGGAAAATGGATTCCAATTC
TTCATGGATCAATTGTCCTTCCGTTTTCTCATCCTCCTCTTCTTCTGCTTCTCGACGATGTCAACAATCCCGATCAGATTTGTATA
TAGGTGCAGGAGGAGGGTACGAGGATCTGGAAGGAGAAGACGATTTAAAATCGGAGTTCATCTGCCCGTTTTGCGCTGAAGTCTTC
GACATCGTCGGGCTATGCTGTCACATTGACGAAGAGCATCCTGTCGAGGCCAAGAACGGGGTCTGTCCTGTATGCACAAAGAGGGT
GGGATTAAATATCGTCGGCCATATCACTACACAACATGCCAACTTTTTCAAGGTGCAGCGAAGGAGAAGGTTGAGAAAAGGTGGTG
GTGGATACAGCTCTGCTTATCTCGCTTTGAAGAAAGAGCTCCGGGAAGCAAACTTACAGTCTCTTCTCGGTGGATCCTCGAGTTAC
ACTTCTTCCACCAATTTAGATTCTGATCCGTTGCTGTCGTCTTTTATGTTTAGTTCTCCTTCAAGCAAATCTGCTACACCTGTTGT
AGCAGGTACCTCAGATACAAAACTCTCGCAGAAAGAATCTCTCAAAAGAGACGTTAGATAAGCTCCACTTAGGGGAAGATCGAGAG
AAGGCGAAGAAGAGCGAGTTTGTGAGAGGTTTGTTCTTGTCAACCATGCTTGGTGAGGATTACTAATGAAAGTCTACTCGCCTTTT
GTTGTTGGGTGATTTTATGAGAAAGTGAGCAATCTTGTGAGGTTAAAAATTGTTAGAGCTTGTAAGTTAAGGAGGGGAGGCCGAGT
TAAATCCATATGTTATTGTCATCGTACTTACCACCTTATAATGTTTATAAACGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187332 protein dehydration-INDUCED 19-4 [Arabidopsis thaliana]8382e-087
XP_002882492 hypothetical protein ARALYDRAFT_477991 [Arabidopsis lyrata subsp. lyrata]8382e-087
BAJ34254 unnamed protein product [Thellungiella halophila]8311e-086
XP_002865722 predicted protein [Arabidopsis lyrata subsp. lyrata]6177e-062
NP_199734 protein dehydration-INDUCED 19-7 [Arabidopsis thaliana]6169e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q8VXU6 Protein DEHYDRATION-INDUCED 19 homolog 48441e-089
Q9FJ17 Protein DEHYDRATION-INDUCED 19 homolog 76514e-067
Q84J70 Protein DEHYDRATION-INDUCED 19 homolog 34202e-040
Q6NM26 Protein DEHYDRATION-INDUCED 19 homolog 64051e-038
Q39083 Protein DEHYDRATION-INDUCED 194023e-038

TrEMBL top hits (Blast detail)Scoree value
B9HX91 Predicted protein5073e-049
B9MZZ9 Predicted protein5038e-049
B9I720 Predicted protein4822e-046
B9RFG1 Putative uncharacterized protein4813e-046
C6SY55 Putative uncharacterized protein4778e-046

Arabidopsis top hits (Blast detail)Scoree value
AT3G06760.1 INVOLVED IN: response to water deprivation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding (TAIR:AT5G49230.1); Has 133 Blast hits to 133 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8441e-090
AT5G49230.1 HRB1 (HYPERSENSITIVE TO RED AND BLUE); protein binding6513e-068
AT3G05700.1 INVOLVED IN: response to water deprivation; CONTAINS InterPro DOMAIN/s: Drought induced 19 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: drought-responsive family protein (TAIR:AT5G26990.1); Has 167 Blast hits to 167 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).4202e-041
AT5G26990.1 drought-responsive family protein4051e-039
AT1G56280.1 ATDI193862e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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