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Information for unigene UN48513

FASTA Sequence
Unigene ID: UN48513Length: 789 SSR 
GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACAGTCATCTGTACCTCTTTGAAGACACTCTTATCTCTTTATCCA
CGAAACCAAAGAACAGAGACAGACAAAATGAGATAAGCGCTCGAAGCCTCTCACCTCTTTCCTCGCTTCTCTTTAGGCTTATTTGT
CAGAGCAAAGACGAACTTACAAGTAGGTGATGGCTACGGCTAGTCCTTCTTCTATCATCAGCAAAGCCTGGCTCATTCCCGGAGCT
GCTTTCACTGTGAAAAAGAATGATTGCTTCTCGCCTAAAGCTGGACAAAAGCAGACACCATCATCAACTCAAAGGCTCTTCTTACC
TCTTTCGACTTCGCTTAAGTTGTTTCCTACTCAGTTTGTGTTGCATCCTCGTCGTAGTAGAGCAGCCATAGGGACTGATGTTGTGG
CAACAGTAGAGGAACAAGACTCTCCTCCTCCTATTGCGGATGATGCAGCTCCTACTACTACTACTACTACTACTACAACATCTCAG
CCAAGGGGAAGGAAGAGTGAAATGCCTGCAGTTAAGAACGAGGAGCTTGTTGCTGGTGCTACCTTCACTGGTAAAGTAAGAGCCAT
CCAGCCCTTTGGTGCTTTCGTCGATTTTGGTGCCTTCACTGATGGACTAGTCCATGTCTCTCAATTGAGTGACACCTTTGTCAAAG
ATGTTGCTAGTGTTGTGACCATTGGACAAGAGGTGAAAGTGAGCTTGTGGAAGCTGACATTGAGTCCAAACGCATTCTCTTACTAT
GCGTGAGATGACGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031743 elongation factor Ts family protein [Arabidopsis thaliana]6085e-061
NP_567820 elongation factor Ts family protein [Arabidopsis thaliana]6085e-061
AAL09789 AT4g29060/F19B15_90 [Arabidopsis thaliana]6085e-061
AAU93601 chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana]6085e-061
BAE98916 hypothetical protein [Arabidopsis thaliana]6085e-061

Swiss-Prot top hits (Blast detail)Scoree value
B0C1M5 Polyribonucleotide nucleotidyltransferase1531e-009
Q482T5 Polyribonucleotide nucleotidyltransferase1469e-009
B4F2C3 Polyribonucleotide nucleotidyltransferase1451e-008
Q7MYZ0 Polyribonucleotide nucleotidyltransferase1423e-008
Q6AJY9 Polyribonucleotide nucleotidyltransferase1404e-008

TrEMBL top hits (Blast detail)Scoree value
Q0WVD2 Elongation factor Ts (Fragment)6084e-061
Q5QEA9 Elongation factor Ts6084e-061
Q93ZG6 AT4g29060/F19B15_906084e-061
Q9SZD6 Elongation factor Ts6084e-061
B9ILQ4 Elongation factor Ts (Fragment)3101e-026

Arabidopsis top hits (Blast detail)Scoree value
AT4G29060.1 emb2726 (embryo defective 2726); RNA binding / translation elongation factor6082e-063
AT4G29060.2 emb2726 (embryo defective 2726); RNA binding / translation elongation factor6082e-063
AT5G30510.1 RPS1 (RIBOSOMAL PROTEIN S1); RNA binding / structural constituent of ribosome1181e-006
AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative1153e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information