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Information for unigene UN48525
| FASTA Sequence |
| Unigene ID: UN48525 | Length: 1179 |
SSR | | GGGACGTCTCTCTCTCTCTCTCTATCGCTTGGTGAAGAAGAGGGTCTATTGATTGATTTATTTCTTTGTTCTCTACGGTAGCTAGT
CTAATCGAATCAAAAAGTTTTTACCTTTCGCGGTCTCTGTTTGCAACCCTAAACTCTCTCCGACACGTTTGTTTTGGATCTCTTCC
CAAAACTGTTTTTTTTTGTTTTGGTAATAATGCGACCGTTTATGTCTGGCTCGAGAGCTTTGTTCAACTTAATCTCATGTCGAAAC
GCAATCAGGAGCCCGATCAATCGCTCCGGGATCATTCAGAGGAGTTTTATATGGAATGGAGTTCGCCGATTTGGTTCTCTTCCGGG
GGTAGAGAGATGCTCTTCATACGGGTTGATGTCAAATGATGATGATGGTAGAAGAGCCGCTTTCGGTACTGGGAGCTTAATTCAAA
GACGGCATTTTCTGGGGTGCGGAGATGGGGAAGAAGGTGGTGGTGAATTGTCAAAGATCTACGAAGAGCGACGTGTCTTGGGGTAT
TCTCAGGAGCAATTGTTTAATGTAGTTCTAGCTGTAGACTTGTACCACGGCTTTGTTCCTTGGTGTCAGCGCTCCGAGGTTCTTAA
AGAATATCCTGATGGCTCTTTCGATGCTGAGCTCGAGATTGGTTTCAAGTTCCTTGTCGAGAGTTACATCTCCCATGTTGAGTTCG
AAAGACCCAAATGGATTAAGACGACAGCGAGAGACACAGGCCTGTTTGACCATTTGATCAACCTCTGGCAGTTCAAGCCAGGTCCC
ATTCCAGGAACCTGCGAGCTTTCTACTCTTGTCGATTTCAAATTCAACTCACCTCTCTATCGCCAGGTGGCTTCGATGTTCTTAAA
GGAGGTAGCAACAAGGCTCATTGGGGCGTTTAGTGACCGATGCCGACTTGTGTATGGTCCTGGAGTTCCTGTCGATGCAAACTCAT
ATGAACAAAAAGCTTGATACATATAATCCTATAATCTATTTAATGAAACTAACAATTATCAGGTTAGTTTGCATGTTGTTTGCTAG
AGAGAGCGATTACCCCATAGCTTTTTGTTGCATTTTTTTTCATATATGAATTGCTTTTGCATTATCAACACATTAGATGTTTGTTT
AAATGTAAAAGCTGAATTTAATTACATCCGTTTCTCCTATTCTTTTGGGAGTTTTATTCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870092 hypothetical protein ARALYDRAFT_493112 [Arabidopsis lyrata subsp. lyrata] | 1077 | 4e-115 |
| AAM65497 unknown [Arabidopsis thaliana] | 1067 | 6e-114 |
| NP_193500 Polyketide cyclase / dehydrase and lipid transport protein [Arabidopsis thaliana] | 1066 | 8e-114 |
| AAK44160 unknown protein [Arabidopsis thaliana] | 981 | 6e-104 |
| XP_002510213 Protein COQ10 B, mitochondrial precursor, putative [Ricinus communis] | 763 | 1e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6DFA6 Coenzyme Q-binding protein COQ10 homolog A, mitochondrial | 303 | 1e-026 |
| Q9H8M1 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 298 | 4e-026 |
| Q5RD79 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 298 | 4e-026 |
| Q567E6 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 293 | 1e-025 |
| Q3THF9 Coenzyme Q-binding protein COQ10 homolog B, mitochondrial | 293 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LAA4 Putative uncharacterized protein | 1067 | 4e-114 |
| Q94K29 Putative uncharacterized protein At4g17650 (Fragment) | 981 | 4e-104 |
| B9R7C0 Protein COQ10 B, mitochondrial, putative | 763 | 7e-079 |
| B9GNW0 Predicted protein | 762 | 9e-079 |
| C6TI14 Putative uncharacterized protein | 713 | 5e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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