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Information for unigene UN48547

FASTA Sequence
Unigene ID: UN48547Length: 506 SSR 
CGGAACTTAAAATTATACATTTGTTTTTATTACTGGGAAAATTAAATACACAAACATCCAAACGTACAAACCTAAGGGGAGAAACA
TCAATTCAAGTATTTTAAACACTAAACACAGCAACAACAACAACAACAACAACAACAACAACAATAACAAACAACAACTATGATGT
AGATGAGAATCAATATGAACTCTCAATTTTATTTAAAACCATAACAATTAATTAGGAAGGGATATTAAATAGCTGCCAATTTGATT
TTGAGTCCACTACTTGTTCATGCCAGATGTTGTCTAATTAGACCACGAATTACAAATGTCTGGAAGAGCTCTATTGCTATTTCGCG
AGGCAATCCACAGCGATGTAATGAAAGTGAGGGTCCAACGACAATCACCGAACGCCCCGAATAATCGACCCGTTTGCCAAGCAGAG
TCTCGCGAAATCTTCCCTCTTTTCCTTCAATTACATCTGAAAATGACTTGTAAACCTTATTATGACCATCCCTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
YP_001671674 RNA polymerase beta' subunit [Carica papaya]3894e-036
P12116 RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta'; Short=RNA polymerase subunit beta'3885e-036
1211235Q rpoC-like ORF 5483885e-036
NP_051050 RNA polymerase beta' subunit [Arabidopsis thaliana]3885e-036
NP_054923 RNA polymerase beta' subunit [Spinacia oleracea]3885e-036

Swiss-Prot top hits (Blast detail)Scoree value
B1A926 DNA-directed RNA polymerase subunit beta'3892e-037
A9LYH6 DNA-directed RNA polymerase subunit beta'3883e-037
Q3V543 DNA-directed RNA polymerase subunit gamma3883e-037
Q5QA71 DNA-directed RNA polymerase subunit beta'3883e-037
A4QJA6 DNA-directed RNA polymerase subunit beta'3883e-037

TrEMBL top hits (Blast detail)Scoree value
A7UDE7 DNA-directed RNA polymerase (Fragment)3884e-036
A7XWS3 DNA-directed RNA polymerase (Fragment)3884e-036
A7XWU4 DNA-directed RNA polymerase (Fragment)3884e-036
A7XWX2 DNA-directed RNA polymerase (Fragment)3884e-036
A7XX02 DNA-directed RNA polymerase (Fragment)3884e-036

Arabidopsis top hits (Blast detail)Scoree value
ATCG00180.1 RNA polymerase beta' subunit-13883e-038
AT4G35800.1 NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase1187e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

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