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Information for unigene UN48548

FASTA Sequence
Unigene ID: UN48548Length: 783 SSR 
GGGTCTCTTCCACCAAAACAAAAAACAAAATGGCTGAGGCAGCACCTGCATTGAGGAAGCCAGTGTTCACCAAGGTTAGTGAGCTG
GGACCAGGAACCAATGGTCTCTCACTTAACGTGAAAGTTATCAGCACGAAGATGGTGATGCAGAGAGGAGGAGGAGGAGGTCGTCC
CAGTGGTCCTCAGGCTCGTCAGATGCGTATTGCTGAATGTCTTGTTGGTGACGAGACTGGAATCATTATCTTTACCGCAAGAAACG
ATCAAGTGGATTTGATGAAAGAAGGGAAGATAGTGACCCTGCGCAATGCGAAGATCGACATGTACAAGGGCTCTATGAGGCTTGCT
GTTGATAGGTGGGGGCGCGTTGAAGTCGCTGAGGATTCCGCAGACATCACTGTCAAGGAAGATAACAATCTTTCCCTCATCGAGTA
TGAGCTTGTGAGCGTTGAAGCTTAATTTTGGTTTAGACACCAAAAGAAATCTCAAAAGACTCCTTTCTCTAGTTGAAGAAGCATTA
GGCCTCTCTCTCTATCTGCTTTCAGTTTGCTTATCAGAATTTGCAGGTTGGTTTTTTGTTGCTGGTTTGAGTCTTTATGCTAGCCT
CTCATGTATGTACCGTTCTCATTTTGAAAATCAGGTTTCCTGTTTTTTTTGTTTTTTTTTTTTAATGTAGATTGATTCTCTTTTTA
TATATCATGGGGTCATTTTCTTGTTTTAGTTTTAGTTTCCTTGTGGACGTTAAAGCAAAAAGAAAACATATATAAGTGTCTTATGT
TTGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892583 predicted protein [Arabidopsis lyrata subsp. lyrata]6255e-063
NP_849633 replication factor A1 [Arabidopsis thaliana]6158e-062
NP_563874 replication factor A1 [Arabidopsis thaliana]6013e-060
AAZ32857 unknown [Medicago sativa]5162e-050
XP_002525380 conserved hypothetical protein [Ricinus communis]5046e-049

Swiss-Prot top hits (Blast detail)Scoree value
O49453 Uncharacterized protein At4g284403842e-036

TrEMBL top hits (Blast detail)Scoree value
Q9XIJ0 T10O24.246155e-062
Q93W05 At1g10590/F20B24_16012e-060
Q45NM5 Putative uncharacterized protein (Fragment)5162e-050
B9SHB1 Putative uncharacterized protein5044e-049
B9HU68 Predicted protein5027e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G10590.3 DNA-binding protein-related6163e-064
AT1G10590.1 DNA-binding protein-related6111e-063
AT1G10590.2 DNA-binding protein-related6111e-063
AT1G23750.1 DNA-binding protein-related4901e-049
AT2G33845.1 DNA-binding protein-related4155e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information