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Information for unigene UN48557

FASTA Sequence
Unigene ID: UN48557Length: 464 SSR 
GGAACACAAAAGGTCCGAACATCTCTTCGTCTCGTTATCGTTTTCGTCGACATCAGAATCTCTAAAGCCAAATCTGTTAATAAAAG
AAGGATGGTGGGAAGTGGAGCTCCACAGAGAGGAAGTGCAGCCGCAGCTGCTAGCATGCGTAGGAGGAAGCCTAGTGGAAGTGGAG
GAGGAGGAGGAGCCTCTGGTGGTGCGGCAGGATCCATGCTTCAGTTCTACACGGATGACGCACCCGGTCTCAAGATCTCCCCTAAT
GTCGTCCTTGTCATGAGCATCGGTTTCATTGCTTTTGTCGCTGTCCTTCATGTCATGGGCAAGCTGTACTTTGTCAAGTGATCATC
GGTTTCATTGCTTGAAACACACCTAAAGTTACTGCTCTAGACCAGTATTAGACACTTGTTTTTAACTCATGTTTTAATTTTGTGGA
GTATTAAGTTTCTTGACATTCAAAGTTTCATTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182033 protein transport protein sec61 subunit beta [Arabidopsis thaliana]3866e-036
XP_002881995 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3866e-036
NP_191613 Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]3283e-029
BAC42429 putative transport protein subunit [Arabidopsis thaliana]3257e-029
XP_002878341 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3257e-029

Swiss-Prot top hits (Blast detail)Scoree value
P38389 Protein transport protein Sec61 subunit beta3864e-037
O43002 Protein transport protein sec61 subunit beta1526e-010
P60467 Protein transport protein Sec61 subunit beta1482e-009
P60468 Protein transport protein Sec61 subunit beta1482e-009
Q9CQS8 Protein transport protein Sec61 subunit beta1482e-009

TrEMBL top hits (Blast detail)Scoree value
B9DGF7 AT2G45070 protein3864e-036
Q9M206 Transport protein subunit-like3282e-029
Q8GY93 Putative transport protein subunit3254e-029
C6T1E8 Putative uncharacterized protein3112e-027
A9P911 Predicted protein3084e-027

Arabidopsis top hits (Blast detail)Scoree value
AT2G45070.1 SEC61 BETA; protein transporter3874e-038
AT2G45070.2 SEC61 BETA; protein transporter3874e-038
AT2G45070.3 SEC61 BETA; protein transporter3874e-038
AT2G45070.4 SEC61 BETA; protein transporter3874e-038
AT3G60540.1 sec61beta family protein3435e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information