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Information for unigene UN48614
| FASTA Sequence |
| Unigene ID: UN48614 | Length: 1110 |
SSR | | AAATAATTTTAGGTTTCTTAGATATAAAGCACATAACTAAGAGACAATTGCATAACAAAGATGCCTTTATAAAATTCGACAAAGAT
TGGAGAGAGTTTCTCTTTAAAAAAAATGACACATTTTACTTGCTTTCTTGAACTGGCACAGAGCTGTTCTTGTCGACCGAATCTGT
AGTATTTTCCTCGGACACCTTGAAGAAAGTGTAAGACAATATCAGGTTGTTGATTCCGTCCATTCTTGAATCAGTCTCAAACTCAG
GATCAATGTAGAAGAACACCGGCATGTCGATCTGTTCTCCGGGAAGAAGTCGCTGCTCCTCAAAGCAAAAACATTGTATCTTGTTG
AAATAAACACCCGCCTTCATGGGAGTGACATTGTAAGTGGAGACTCCAGTTATTGGAGCTGAACTTTTGTTTTCAGCAGTGTAAAA
GGCGAGCGCGCTTTCTCCTGGCTTTACTCTCACCTCTCTTTGAGTTGGAGTGAACTTCCACTGCATCCCATCTGCAACATCAGCAT
TAAACTGCACCACTATCTCCCTATTTACAAGCCTTTCAGTTACGGTGCCAGATTCTGAATGCCTAGCAATCTTCTCCTCAACAGTC
TCTTTGCGTTGAACAGTACCACCATATCCAGTAGCTTGGCAGAAGGTTCTATACAACGGCACAGCGGCGTAAGTTAGCCCAACCAT
GCCAAAGACGACAGCAGTGAGGTAATAGAGCATCTTCTTCGATTTGGTTTCTGTTATCGTCTGAGTAGAAGAATAGTGGCGATGAG
CACTAGTAAGCAACATCGATTTAGCAGCAGCAGCAGCGGAATGAGAATTCAAAGTGAAAAACGAAGATGAGCTTCCCAAAAGCCCT
CTCTTGTTTCGGAGATTATGCTGATTGCCATTACAAGCTCCATGAGTGTAATAACGAGAGCTAGGCACAAGAGGCACAGTCCTCGA
TGTTCGATGAAGATTCTCTAAATACGAAGAGATTCGAGTCCCTCTACATGCTTCGACCACGACATGGCCGAAGATTAATTATTTCA
ATCGATCGAGACAGTGAGGAAACACTACACACAACTACTAATCGGTAACGGAACGACGTCGTTGTATCGTCGGCGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889401 cytochrome c oxidase assembly protein CtaG [Arabidopsis lyrata subsp. lyrata] | 1216 | 3e-131 |
| NP_171743 cytochrome c oxidase assembly protein CtaG / Cox11 [Arabidopsis thaliana] | 1199 | 3e-129 |
| AAG00893 Similar to cytochrome-c oxidase assembly protein [Arabidopsis thaliana] | 1006 | 6e-107 |
| XP_002297920 predicted protein [Populus trichocarpa] | 805 | 1e-083 |
| XP_002277478 PREDICTED: hypothetical protein [Vitis vinifera] | 789 | 9e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O21243 Cytochrome c oxidase assembly protein ctaG | 495 | 5e-049 |
| Q86ZU7 Rsm22-cox11 tandem protein 2, mitochondrial | 485 | 7e-048 |
| Q9UTM2 Rsm22-cox11 tandem protein 1, mitochondrial | 480 | 3e-047 |
| Q54HM6 Cytochrome c oxidase assembly protein COX11, mitochondrial | 459 | 7e-045 |
| P19516 Cytochrome c oxidase assembly protein COX11, mitochondrial | 447 | 2e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWR0 At1g02410 | 1199 | 2e-129 |
| Q9FZ20 T6A9.10 protein | 1006 | 4e-107 |
| B9GK24 Predicted protein (Fragment) | 805 | 9e-084 |
| B6T5S8 Cytochrome c oxidase assembly protein ctaG | 776 | 2e-080 |
| A2XLF5 Putative uncharacterized protein | 773 | 5e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G02410.1 cytochrome c oxidase assembly protein CtaG / Cox11 family | 1225 | 1e-134 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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