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Information for unigene UN48624

FASTA Sequence
Unigene ID: UN48624Length: 1183 SSR 
CAGTGAGCCGCCTTCCCTTCCTTGTTACTCTCCTCTCGCTCAACCGGTTCCTCCCAAGCAAGCAAGCAAGCAAGCTGCTTTCGATC
TTCCTTTTCGTGCCCTCGTTTCTAATCCTCAAAAGGGACACTACAGACATGTCTGAATCCAAGGATGAGAAAGCGCAGGTTGCAGC
TGACAGGATCAAGGCCGCAGCACTCACTGCTTCCAAAGGTTTAAGCCGCACCCAAGCCGAGAGAGCAGCGGCTGCTGCTTCCAGGA
ACGTCAACGCTTACGGTCAGAAGGAAGAAGGTCCTAGCAGATGGCAGGAGAAGAGGGAAGCCAAGAGGCAGATGTATCTGATGAGT
ACCGAGAAAGCCGTCAGGCTTGGGGAGAGGAAGGACAAGTCGGTGTCGGCATCTGTCGTGGGAGGAGGAGGAAGCAGCTTGGCGGC
TTCGCAGTGCCAGAAGTGTTTCCAGACGGGGCACTGGACTTATGAGTGCAAGAACGAGAGGGTTTACATCTCCAGGCCTTCCAGAA
CCCAGCAGCTTAAGAATCCTAAGCTGAGGATGAAGCCTTCTGTTGATGATCTTGGTGATGATGAGAAGGTAGATGCAGGAAACGGG
AAAGATGATGAGGAAGGTGAGAGGCGGTCGTCTAAGAAGAGCAAGAGAAAGCAGAGGTCGAAGTCTGATTCTGGGAGTGATAGCGA
GGCCTCTGTGTTTGAAACAGATAGTAGTGACGGCTCTGAATCATCTGGGGAGAGTGATTCTGAATACAGTTCGTCGTCTGACTCAG
AGGAGGAGGAAAGGAGGAGGAGAAGGAATAAGAGGAAGAGCAAGAAGAAGCCAAAGCAGAGGAAGGAAAGGCAAAGGAGAAGAAGA
TACAGCTCTTCTTCATCTGAGGAGTCATCTGATTCGGAATCAGCTTCGGACTCTGATTCTGATGAAGACAGAAGAAGCAGTAGAAA
GAAGAAGAGCAAGAGGCACAGCGGCAGCAACAAACGTCGTTGAGTTGGGTTTTAGGAAAATCTGAAGTGAATGATGAGTACTTTTT
TTCTATATGCGTTTTTAGAGTGAGTCATTTTGAGCTACTTGAAGAATACTCGCAGCTTCTTTTTCTCAAGTTTCAACTTTCCCTTT
TCTCAGCCATTCATGGCTTTGTGTTGTAGTAAACTGATGGATTTGAGAATCTCTTTTATTTTCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863980 hypothetical protein ARALYDRAFT_494997 [Arabidopsis lyrata subsp. lyrata]10434e-111
BAB09910 unnamed protein product [Arabidopsis thaliana]10263e-109
NP_199751 zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]10254e-109
XP_002312338 predicted protein [Populus trichocarpa]8661e-090
XP_002314930 predicted protein [Populus trichocarpa]8231e-085

Swiss-Prot top hits (Blast detail)Scoree value
P32583 Suppressor protein SRP401901e-013
P27476 Nuclear localization sequence-binding protein1864e-013
Q9Z1T1 AP-3 complex subunit beta-11757e-012
A1A5I1 Protein FAM1331757e-012
Q9NZW4 Dentin sialophosphoprotein1684e-011

TrEMBL top hits (Blast detail)Scoree value
Q9FGX7 Similarity to unknown protein10262e-109
Q6NMK2 At5g4940010253e-109
B9HIQ5 Predicted protein8668e-091
C6TEM3 Putative uncharacterized protein8319e-087
B9HWY1 Predicted protein8292e-086

Arabidopsis top hits (Blast detail)Scoree value
AT5G49400.1 zinc knuckle (CCHC-type) family protein10377e-113
AT5G53800.1 unknown protein2195e-018
AT4G02720.1 unknown protein2062e-016
AT4G32420.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1622e-011
AT4G32420.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1622e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  20%
 
213  60%
 
181  20%

Unigene MembersMember information