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Information for unigene UN48628
| FASTA Sequence |
| Unigene ID: UN48628 | Length: 792 |
SSR | | GGAGACGTGAAGCAAGCAACAACAATACTTTCTGAATCCAAAAACCCTAAATCTCCTTTACCTTTCTTTTGTCGCTGGAGAAGATG
GCTTCTTCGATATACTTAAAGCCAACGAACCTCCTCCTCCTCTCTTCTTTCTCCACAGGCAGAGTCCTCCATCTCCGCCGCCCCTC
CCGTTTCAGCCACAGACCGTCTTCTTCTTCTTCTTCGCCTCGGACTGTCGTGGCTCAATTCGGGTTCAGTCAAGGCCCCCTTTCTC
TCGATTTGATCAAGGAACATGCCGAGAGCCTCCTCTACACGATCGCTGATGCCGCTGTCTCGTCCTCCGAGACATTTGATTCTGTT
TCCGGCACTACCACCACGACCACGAGCAGCCAGAACAGTGATTGGTTCACTGGTATCGCCAATTACATGGAAACCATTCTCAAGGT
TTTGAAAGATGGGTTATCAACTGTGAATGTTCCTTATTCTTATGGTTTCGCTATCATTCTACTTACCGTGCTTGTTAAGGCTGCTA
CCTTCCCATTGACCAAAAAGCAGGTCGAATCTGCAATGGCTATGAAGTCTTTGCAGCCTCAGATTAAGGCTATTCAGGAACGGTAT
GCTGGTGATCAGGAGAAAATTCAGCTTGAAACTGCCAGATTGTATAAACTTGCTGGAATCAATCCCTTTGCAGCTGTCTCCCCACA
CTAGCCACCATACCAGTCTGGATTGGCCTATATAGAGCCCTCTCAATGTTGCGGATGAGGGACTCTTAACGGAAGATTTCCTGGAT
CCTTCTCTTGCCGGTCCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173858 ALBINO3-like protein 1 [Arabidopsis thaliana] | 746 | 5e-077 |
| BAE98788 hypothetical protein [Arabidopsis thaliana] | 746 | 5e-077 |
| XP_002515035 conserved hypothetical protein [Ricinus communis] | 520 | 8e-051 |
| EAY92553 hypothetical protein OsI_14293 [Oryza sativa Indica Group] | 481 | 3e-046 |
| AAS07376 putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] | 474 | 2e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FYL3 ALBINO3-like protein 1, chloroplastic | 748 | 1e-078 |
| Q9FY06 Inner membrane protein PPF-1, chloroplastic | 430 | 1e-041 |
| Q8LBP4 Inner membrane protein ALBINO3, chloroplastic | 428 | 2e-041 |
| Q8LKI3 Inner membrane ALBINO3-like protein 2, chloroplastic | 311 | 6e-028 |
| Q8S339 Inner membrane ALBINO3-like protein 1, chloroplastic | 293 | 8e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WVR0 Putative uncharacterized protein At1g24500 | 746 | 4e-077 |
| B9RMR6 Putative uncharacterized protein | 520 | 6e-051 |
| A2XNZ3 Putative uncharacterized protein | 481 | 2e-046 |
| Q10AQ5 ARTEMIS protein, chloroplast, putative, expressed | 474 | 1e-045 |
| Q75LC5 ARTEMIS protein, chloroplast, putative, expressed | 474 | 1e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G24490.1 ALB4 (ALBINA 4) | 753 | 3e-080 |
| AT2G28800.1 ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | 428 | 2e-042 |
| AT2G28800.2 ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | 428 | 2e-042 |
| AT2G28800.3 ALB3 (ALBINO 3); P-P-bond-hydrolysis-driven protein transmembrane transporter | 428 | 2e-042 |
| AT1G24490.2 ALB4 (ALBINA 4) | 369 | 1e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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