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Information for unigene UN48668

FASTA Sequence
Unigene ID: UN48668Length: 1005 SSR 
GGATGTGTTCTTATTCCAGAGAAAACAAAAAAAACAGAGTAAAGCTTTTGAAAAGCAGAGCATAAAGAGCGCCTTTTTTTTGTCTG
CTAAGTTCAAACGCAGAGACGAACGATCGGAGAGATGGGAGACGTGATAATATCCATAGAAGATACAGATATTAATTCGAGTTTGT
CGCGCTGCAGAATTTGTCACGAAGAAGAAGAAGAAGCAGAGAGCTACTTTGAAGCTCCTTGTTCTTGCTCAGGCACCGTCAAGTTT
GCTCACAGAGATTGCATACAACGATGGTGTGATGAGAAAGGAAACACGATTTGTGAAATATGTCTCCAGGATTATAAACCTGGATA
CACCACAACTTCAAAACCATCTCGTTTAGTTGAAGCAGCAGTCACAATCAGGTATTTAAATTGTTCATACTATATATAAATATTTC
TTCACAAGCAGCAAGATGTATTAATCTTTTATTGTTTCGGATATAAATAATTAACAACAATGATCGTAGGACGAGGAGACAATATG
GAGGAAGAAGAAATAGAAGATTAGTGAATAGAACTGAATCAGAATTTCCAGAATGCAACTCTGAAGTTGACAGAGGCGCTTCTTGT
TGTAGATACTTGGCTCTTATTCTATCGGTGGTTTTGTTGATAAAGCATGCGTTTGATGTGGTTTACGGAACCGACGAATATCCCTT
CACGATTTTGACGGTATTAACACTGAAGGCCATTGGTATACTATTGCCAATGCTCTTAATCATTCGGACTATCGCAGCTGTTCAGA
GCAGTCTCCGACGTCAGTTTATCGAATCTGAAGAAGATAGGTTGAGCTCTGAAGAAGAAGATGATGACTTGGAGGAGGAAGAGCAA
CAGCAACATTTGGCTTGATCTTTATTTTCTTCGTTAAACCTTTGTCTTTTTTATGAAAGCATAAGACTCTCATATACAAATAGAAA
TCTGTAACCACTATCAACTGTAACGTATGTTAAATTAATAATCATAAGAGTTTTAAGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892113 predicted protein [Arabidopsis lyrata subsp. lyrata]5173e-050
NP_171761 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]4984e-048
AAG10626 Unknown protein [Arabidopsis thaliana]4951e-047
XP_002872858 hypothetical protein ARALYDRAFT_490373 [Arabidopsis lyrata subsp. lyrata]4018e-037
NP_567222 protein pitchoun 1 [Arabidopsis thaliana]3831e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q32L65 E3 ubiquitin-protein ligase MARCH21236e-006

TrEMBL top hits (Blast detail)Scoree value
Q9FWY0 T14P4.10 protein4957e-048
Q9XF50 At4g020753837e-035
B7FL62 Putative uncharacterized protein3254e-028
B9RNF6 Protein binding protein, putative3182e-027
B9GSS0 Predicted protein (Fragment)3173e-027

Arabidopsis top hits (Blast detail)Scoree value
AT4G02075.1 PIT1 (pitchoun 1); protein binding / zinc ion binding3843e-037
AT1G02610.1 zinc finger (C3HC4-type RING finger) family protein3082e-028
AT5G38070.1 zinc finger (C3HC4-type RING finger) family protein2472e-021
AT2G01275.1 zinc finger (C3HC4-type RING finger) family protein2347e-020
AT2G01275.2 zinc finger (C3HC4-type RING finger) family protein2347e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information