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Information for unigene UN48675

FASTA Sequence
Unigene ID: UN48675Length: 1087 SSR 
GGATAAACCCTAAAAGTTTCTCTCTCAAAAACCAAATTTGCATTTGCTTCTTCATCATCTACTCCTTACTTTTTTTTCTCCCTGCG
AAACAGAGTAGCATCTCGGGTTCAGCAGCTTCATTTAGGCCTGACTGGTTTAACCGCAGCGGTTGCGTTTGCGGTTGCGGGAGTTT
ACGGGTGCGGGTGGTTGCGGTTTCAAGCGTTTTCTAGAGATTTGTACGACTGAACTAAAAGTAATCAGAATTGCTTGATCATAATC
ATGGAGGAAGCAACTCAAGTAGCGAGTTCCGAGGTTCCTGTAGTGAAAGGAGATGCTGATGACCTTAAGACAGTTGATGTTTCTGT
CAAGGCTGTGAACGGAGATGTGACGAAGGAAGGTAAAGGAGAGGATGATGGGGAGTTCATAAAAGTTGAGAAGGAAGCTTTTGACG
CCAAAGATGATGCAGAGAAAAATCAAGTTTCAATTGAAAGAAGCTCGAGTGGTTCGCTAAGAGAACTACAAGAATCACAAGAGAAG
GCGAAGGAGCTAGAGCTGGAGTTGGAAAGAAAGAGAGAGAGAGTAGAAGAGGTAGAAGCAATGGAGGGAGCAGAAGAAGCTGGAGC
GGAGATAATGGTTGATTCAAAGGACTTACAGCAACAAAGCAAAGCTTTAGACAAGCTTACCGATCGCGTTGAGGATCGCCAGCTCG
ATTCTAATCGTGTTCAATCGGCTATGGCTTCGATTGCTGCTTCTAGAGAGGCTGATCTGAATGCTAAGAGATTGAGGGAGAAGGAA
CTGGCTTCTGTTAAGATCAATGCTGCAGATGTTGAGCCCATTGTAAACGAACTCGAGCTGGAGAAGAATGTTGTGGAGAGAACTCT
AAGGGAGCACAAAGGCGATGCAGTTGCTGCAACTAGGGAATTGCTTTCTCGATATCCACTTTGATCGATCATTACCTGCTTTACTT
CTCGCAGTTTCTTTTGTCTGTGTAAGGTGTCCGAATATTCAACTCATGTTTGAAGTTTCCGTACTAAACTTATGAGATATTATTGC
AACAGTGGCACATGCTAAAAGCAAGACAATAATAAGTTTAACATTAATCCGTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566288 DNA-binding enhancer-like protein [Arabidopsis thaliana]5112e-049
XP_002882482 hypothetical protein ARALYDRAFT_477968 [Arabidopsis lyrata subsp. lyrata]5022e-048
XP_002316045 predicted protein [Populus trichocarpa]4206e-039
XP_002311382 predicted protein [Populus trichocarpa]4125e-038
XP_002519232 conserved hypothetical protein [Ricinus communis]4125e-038

Swiss-Prot top hits (Blast detail)Scoree value
O94317 Uncharacterized serine-rich protein C215.131756e-012
Q75JC9 Uncharacterized protein DDB_G02716701731e-011
Q9NX55 Huntingtin-interacting protein K1712e-011
Q9CR41 Huntingtin-interacting protein K1684e-011
Q2PFU1 Huntingtin-interacting protein K1675e-011

TrEMBL top hits (Blast detail)Scoree value
Q9C901 Putative uncharacterized protein5111e-049
B9HX26 Predicted protein4204e-039
A9PBV5 Predicted protein4123e-038
B9RZR3 Putative uncharacterized protein4123e-038
A2Q2W3 Putative uncharacterized protein4071e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G06610.1 DNA-binding enhancer protein-related5125e-052
AT2G32240.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05320.3); Has 221693 Blast hits to 95553 proteins in 2574 species: Archae - 2848; Bacteria - 44259; Metazoa - 97474; Fungi - 15490; Plants - 8386; Viruses - 1229; Other Eukaryotes - 52007 (source: NCBI BLink).3736e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information