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Information for unigene UN48705

FASTA Sequence
Unigene ID: UN48705Length: 874 SSR 
GACTGCACGCGCATTGGAGTACTTGCATGAAGTTTGCTCACCGTCTATAGTCCACAAGAACATCAAATCAGCTAATATTTTACTTG
ACGCAGAGCTGAACCCTCACCTCTCAGACGCTGGTCTCGCTACCTTCCTCCCTACTGCTAATGAGCTACTGAGCCAAAACGATGAA
GGATACAGCGCACCAGAAGTATCAATGTCAGGCCAATACTCACTGAAGAGCGATGTGTACAGTTTTGGAGTAGTGATGCTTGAGCT
TTTAACCGGAAGAAAACCATTTGACAGCACAAGGTCAAGATCGGAGCAGTCATTGGTGAGATGGGCAACACCTCAGCTACATGACA
TTGATGCATTGGGGAAAATGGTTGATCCAGCTCTCAAAGGGCTTTACCCTGTTAAATCTCTATCCCGGTTTGCAGATGTTATCGCA
CTCTGCGTCCAGCCGGAGCCAGAGTTTAGACCACCGATGTCTGAAGTGGTGCAAGCGTTGGTTGTGCTTGTGCAGAGAGCTAACAT
GAGCAAGAGAACTGTCGGAGTCGGGTCTGGTGGTAGCTCTGGAGCTAATGACTACATGTAAATTCTTTACCTGAGAAACCAAAAGA
CGAACAAAATCAACAAAACAGAAGTTTTTTCTTTTTTTTTTGTTCTTCATAAAACTGAGAGAATAACGACAACAACAACAACAAAC
TTTACGCATTGTACAATCCCATGTTTCCTTGTAATATGTTCCCAAGTCTGTAGCTTTTTTTAGATTCCGACACGATGAACAAAACC
ATGTCCTTTTGTGAGTTTTTGGAGCCAAGACTGTCTTTATCCATATTCTGTATTATTTTTGTTTCTCAATTATTTTCTTGTTAATA
AATCGAATTACAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188052 STRUBBELIG-receptor family 7 protein [Arabidopsis thaliana]9232e-097
NP_974312 STRUBBELIG-receptor family 7 protein [Arabidopsis thaliana]9232e-097
NP_974311 STRUBBELIG-receptor family 7 protein [Arabidopsis thaliana]9232e-097
XP_002885038 hypothetical protein ARALYDRAFT_478852 [Arabidopsis lyrata subsp. lyrata]9152e-096
ABB20817 putative leucine-rich repeat transmembrane protein kinase [Isatis tinctoria]8838e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUL4 Protein STRUBBELIG-RECEPTOR FAMILY 79238e-099
Q9C8M9 Protein STRUBBELIG-RECEPTOR FAMILY 68772e-093
Q6R2J8 Protein STRUBBELIG-RECEPTOR FAMILY 86836e-071
Q6R2K1 Protein STRUBBELIG-RECEPTOR FAMILY 56137e-063
Q6R2K2 Protein STRUBBELIG-RECEPTOR FAMILY 45277e-053

TrEMBL top hits (Blast detail)Scoree value
B5X583 At3g143509231e-097
Q079I0 Leucine-rich repeat transmembrane protein kinase8835e-093
C0LGH0 Leucine-rich repeat receptor-like protein kinase (Fragment)8773e-092
C5WVR0 Putative uncharacterized protein Sb01g0450107528e-078
O81105 Leucine-rich repeat transmembrane protein kinase 1 (Fragment)7482e-077

Arabidopsis top hits (Blast detail)Scoree value
AT3G14350.2 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase9282e-100
AT3G14350.1 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase9282e-100
AT3G14350.3 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase9282e-100
AT1G53730.1 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase8781e-094
AT1G53730.2 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase8663e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information