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Information for unigene UN48712
| FASTA Sequence |
| Unigene ID: UN48712 | Length: 1009 |
SSR | | TCATGATCTTCTCTCTCCCTTCAAACGTTTTTAGTTCCAAAAAGAACTAAAAACCCTAGAAACGAAACAATCTTTAGTCTCCAATT
CGTTTTCTGATTACCTAATATAGTACGTGTTGCTAATCCTTATTAAGCAATATGATTAACTTTGAGGCAACGGAGCTGAGGTTAGG
GCTGCCGGGTGAGAATCACGTAGGAGCCATGACTGTGAAGAATAATGGGAAAAGAGGATTTTCTGAGACTGTTGATCTCAAGTTGA
ATCTTTCATCGACGGCTGTGGATTCAGTTTCTAAAGTTGATTTAGAGAATATGAAGGAGAAGGTCTTAAAACCACCGGCCAAGGCA
CAAGTTGTGGGATGGCCGCCGGTACGATCTTTCCGGAAGAACGTCATGTCATGCCAAAAGCCAACCATCGGAGATGCCATCCAAGC
AGAGGAAAAGACTTTCGGCAGCAGCGGAGTTACCTCCTCTGCCTCCGCTTGTGCTACCGCAGCTTACGTGAAGGTTAGCATGGACG
GTGCACCGTACCTAAGAAAAATTGATTTGAAACTCTACAAAACTTACCAAGATTTTTCCGACGCCTTAAGCAAAATGTTCAGCTCT
TTTACTATAGGCAATTATGGACCACAGGGAATGAAAGATTTTATGAATGAGAGTAAATTAATCGATCTTTTGAACGGATCAGATTA
CGTTCCAACTTATGAAGATAAAGATGGAGACTGGATGCTTGTAGGAGATGTACCATGGGAGATGTTTGTTGATTCATGCAAACGCA
TAAGAATTATGAAGGGGTCAGATGCAAAAGGACTTGCTCCAAGGGCTTTAGAAAAATGCAAGAACAGAAGCTGAGTGATTGCCCCA
AAAAGGCAACAAAGACCGGTTAGATCCGGTTATATATTCAAACAGAGAAAAGCCAAACCGGCTCGAGTTACCGTTCCGAGCAGAGA
GTTTGTGTATAATAATAATAATATTTTGATGAATTACATTTTTAAATTTAACCCTTTTTTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187124 auxin-responsive protein IAA16 [Arabidopsis thaliana] | 1112 | 3e-119 |
| XP_002884465 indoleacetic acid-induced protein 16 [Arabidopsis lyrata subsp. lyrata] | 1082 | 8e-116 |
| ABV89663 indoleacetic acid-induced protein 16 [Brassica rapa] | 1030 | 9e-110 |
| BAJ34138 unnamed protein product [Thellungiella halophila] | 1022 | 8e-109 |
| XP_002531288 Auxin-responsive protein IAA16, putative [Ricinus communis] | 826 | 4e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O24407 Auxin-responsive protein IAA16 | 1112 | 1e-120 |
| Q38825 Auxin-responsive protein IAA7 | 742 | 1e-077 |
| P13089 Auxin-induced protein AUX28 | 571 | 7e-058 |
| P0C132 Auxin-responsive protein IAA30 | 526 | 1e-052 |
| Q38832 Auxin-responsive protein IAA14 | 525 | 1e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNJ2 Auxin-induced protein | 1112 | 2e-119 |
| A8IXW6 Indoleacetic acid-induced protein 16 | 1030 | 6e-110 |
| B9SZ69 Auxin-responsive protein IAA16, putative | 826 | 3e-086 |
| C8CBW3 Auxin/indole-3-acetic acid 3 | 796 | 9e-083 |
| A9PCY8 Predicted protein | 791 | 3e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04730.1 IAA16; transcription factor | 1113 | 9e-122 |
| AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 743 | 7e-079 |
| AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 608 | 3e-063 |
| AT5G65670.2 IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE 9); transcription factor | 528 | 6e-054 |
| AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | 526 | 1e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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