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Information for unigene UN48724

FASTA Sequence
Unigene ID: UN48724Length: 1294 SSR 
GGACATGTAAAAGTCTTATCTCTTCTCTTGTCATAAATCTGTCTTCTCGTCAAACTTCTTCCTGTTTTTCTGATACTCTCCTCCTA
ATCTCTAAATATTCAGATCCAACAACTCTAGATAGATATTCCATCATCTTCTTGCGTCATCCTGCTCAACTCTCACGTTCTTACTC
TGTCCATGAATGTGAAACGAAGATCCACCGTTAGTTCGATACCAAAGATGCGTTCTCTTGCGGCTATTGTACTCCTTCTCAGCTTC
AGTTCATGTTGTTCGCTTAAGGAAGAAGGTTTAGATAAAGATAGATTAGAGAAAGATCTTTGGTCTGATGAAGATTCTGCGATTCT
GAAAGCTGTTGGGTTTCACAGGAAAGAACTTGCACCTCGTAGCCCAGTATCATACGACAAGTTGCCTTCCAGGAGAAACAGCCGTG
AGGCTGGGGCTGCAACTATCACTCCACCATCATCATCCCCACAACCTTCTCAAAAGAATGTCTCAACTCAATCTTCAACAGCTTTG
GATCCAGGAGCCACACAAGATGTTTCTCCTTCACCTCCTCCTCCTCCTCCGTCTGTGCCTCTTGCAAGCTCTCCCACTCCAAGAAC
CTCTGCTTCTTCTTCTTCTTCCTCTTCTTCAGTGGTTGGTCCTGTAGTTGCTGCCTGCGTAGGCGGTGTTGTTCTTATCATCCTTG
TAGCTACCGGTGTGTTCTACTTCAGAAGAAAAGTAGGGAAGTCAGTGAATCCTTGGCATACAGGTCTTAGCGGTCAACTTCAGAAA
GTCTTTGTAACTGGTATCCCCACTCTAAAAAGATCTGAGATTGAAGCTGCATGTGAAGACTTTAGCAACGTTTGGATCATGTCCTA
TTGGTAAACTCTTCAAAGGAACGCTATCAAGTGGAGTGGAGATAGCTGTCGCTTCTATTAACACTACTTTTGCCAAAGACTGGAAA
GACAATACAGAGATTCAGTTCAGGAAGAAGATTGAGATGTTGTCCAAGATAAACCACAAGAACTTTGTAAACCTTCTTGGCTACTG
TGAAGAAAACGAACCTTTCACCAGGATCTTGATCTTTGAATATGCTCCAAACGGTTCACTCTTTGAACATCTACACAGTAAAGAAT
CAGACACTTGGACTGGGGAATGAGTTAAGAATCTTAATGGGGTTAACATATTGCCTTGACATATGCACACTCAGCCACGATAGCTC
ACACAAACTCGTCTCATCATCACTCACTCACTGAGATACGCTGTAACTAGCTGACTCAGTTTGTCGTCGAGAAGAGACGTGCACAC
GCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881709 kinase family protein [Arabidopsis lyrata subsp. lyrata]4422e-041
AAD25942 hypothetical Ser-Thr protein kinase [Arabidopsis thaliana]4378e-041
NP_973647 Protein kinase family protein [Arabidopsis thaliana]4378e-041
NP_565925 Protein kinase family protein [Arabidopsis thaliana]4378e-041
XP_002881706 hypothetical protein ARALYDRAFT_903309 [Arabidopsis lyrata subsp. lyrata]4378e-041

Swiss-Prot top hits (Blast detail)Scoree value
C0LGQ4 Probable LRR receptor-like serine/threonine-protein kinase MRH13102e-027
C0LGU7 Probable LRR receptor-like serine/threonine-protein kinase At5g458402976e-026
C0LGH8 Probable LRR receptor-like serine/threonine-protein kinase At1g634302232e-017
Q9LX66 Receptor-like protein kinase HERK 11552e-009
Q9FZB8 Probable LRR receptor-like serine/threonine-protein kinase At1g518101498e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LYN6 Putative uncharacterized protein4502e-042
Q3EBJ0 Putative uncharacterized protein At2g40270.24375e-041
Q9SIZ4 At2g40270/T7M7.154375e-041
Q9XEF4 Hypothetical Ser-Thr protein kinase4375e-041
B9SQR1 Receptor protein kinase, putative3766e-034

Arabidopsis top hits (Blast detail)Scoree value
AT2G40270.2 protein kinase family protein5215e-053
AT3G56050.1 protein kinase family protein4509e-045
AT3G56050.2 protein kinase family protein4509e-045
AT2G40270.1 protein kinase family protein4373e-043
AT4G18640.1 MRH1 (morphogenesis of root hair 1); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase3102e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
101  50%

Unigene MembersMember information