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Information for unigene UN48742
| FASTA Sequence |
| Unigene ID: UN48742 | Length: 1344 |
SSR | | GGGAGATCGCCGTTTGGATCGGGTTTCTGTGAACCCATCGGAAAAATAAAAAAAAGGGAGAGAGAGAGAGAACCAAACTGAGAGTT
TCTCTACTGTTACTTTCGACGCTTCCAACCTCTTACCTTTGTCCGAATGAAATCATCAGTTACGCACAAGGAATGACGAGTAGCTC
GTCATCTAAGAAACAAGCTCAAGATCCGCCTGAATCCTCCGAACCCACTTTGAAATCCCTCAGAACCAAGATGACCAAATCCGACG
AAAAGAAGAAGCTTAAAGACATTGAGATAAGCGTTCCACTTGTCTATGGTAACATTGCTTTCTGGCTCGGCAAGAAGGCTAGCGAG
TAAGTCTTTCGAGTTAATTGGAAAATAATACCCCTTTCAATTGAAATGGTCTTAAAAAAATCCTATGTTTGTGCAGAAACCAATCT
CACAAATGGGCTGTATATGTTCGTGGGGCAACAAACGAAGACATCAGTGTTGTAATCAAGAAAGTCGTCTTTCAGCTTCATTCTAG
TTTCAACAACCCAACAAGAGTCATCGAGGAGCCTCCATTCGAGGTCTCCGAATCTGGCTGGGGAGAATTCGAGATTGCTATCACAT
TGCATTTCCACAGCGACGTCTGTGACAAGCCATTGAGTTTGTAAGTCTCCCCATTATGGATATCTATCTATCTATTTATCGTATCA
CTTACTGGTGTTACAAAAAAAACAGATATCATCACTTGAAGTTATACCCAGAAGATGAATCAGGTCCTTTGACAATGAAGAAGCCT
GTGGTTGTCGAACACTACGACGAGATCGTGTTTCCTGATCCTTCTGAAAGGTTTCTTGCTAGGGTTCAGAATCACCCTGCTTTGAC
GTTTCCTAGATTACCCTCTGGTTACAGCTTACCTGCTCCTATGCAAGTCGATGATAACGGGAAAAAGAAGAGAGGTGATACTAAAG
ATCATAGCTTGGGACAATGGTTCACGAGCTTCTCTGAAGCCGATGAGTTGTTACAGCTTGCGGCTGCTCGTCAACAGGTTCAAGCT
CATATTGCTAAACTTAGGCGACAAATAAGCTTGCTAGAGGGACAGAATCAGACCATCAAAACAGGTTCTGATCCGTGAAGCTGTAG
CCAGTTTCCATTGGTGGAGTGGGAGATTGGTTTTGTTGTAACATTAATGTGTATCAGTACTATTAGCGTAGCGCTTTTTTTTACCA
GTCTTGATACATTCTCTCTAAGAATCAGTTTGCTCGGACTGTTGACTAACTAGGGGTGGCCTTTGAGTGTTTAGCATTTTCGGGTT
TTACATGATTTCGGCTCGGGTTTGGTTCATAATATCATGGGGTTCAGTTCGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199373 YEATS family protein [Arabidopsis thaliana] | 648 | 3e-065 |
| NP_001190475 YEATS family protein [Arabidopsis thaliana] | 648 | 3e-065 |
| XP_002865236 hypothetical protein ARALYDRAFT_494425 [Arabidopsis lyrata subsp. lyrata] | 645 | 6e-065 |
| XP_002306148 predicted protein [Populus trichocarpa] | 552 | 4e-054 |
| XP_002313001 predicted protein [Populus trichocarpa] | 527 | 3e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q755P0 Protein AF-9 homolog | 221 | 4e-017 |
| P53930 Protein AF-9 homolog | 216 | 1e-016 |
| Q10319 Protein AF-9 homolog | 215 | 2e-016 |
| Q6CIV8 Protein AF-9 homolog | 211 | 6e-016 |
| Q5BC71 Protein AF-9 homolog | 209 | 9e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FH40 Putative uncharacterized protein At5g45600 | 648 | 2e-065 |
| B9H0Z7 Predicted protein (Fragment) | 552 | 3e-054 |
| B9HRD9 Predicted protein | 527 | 2e-051 |
| C6TC74 Putative uncharacterized protein | 477 | 1e-045 |
| B9SXM8 YEATS domain-containing protein, putative | 458 | 2e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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