RadishBase

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Information for unigene UN48767

FASTA Sequence

Unigene ID: UN48767	Length: 543	SSR
GGGAGTCTTGATTCACCGAAACTCAGAGAGAGAGAGAGAGAGAGAAGAGAAGAGTTAGAAGCAATGGAGGGAGGAGAAGAAGCTGG AGCTGAGATAATGGTTGATTCAAAGGACTTGCAGCAACAAAGCAAAGCTTTAGACAAGCTTACCGATCGCGTCGAGGATCGCCAGC TCGATTCTAATCGTGTTCAATCGGCTATGGCTTCGATTGGTGCTTCTAGGGAGGCTGATCTGAATGCTAAGAGATTGAGGGAGAAG GAACTGGCTTCTGTAAAGATCAATGCTGCAGATGTTGAGCTCGTTGTAAACGAACTCGAGCTGGAGAGGAATGTGGTGGAGAGAAC TCTAAGGGAGCACAAAGGCGATGCAGTTGCTGCAACTAGGGAATTGCTTTCTCGATATCCTCTTTGATCGATCAGTACCTGCTTTA CTTCTTGCAGTTTCTTTTGTGTGTGTGTGAGGTTTGAGAGACGTGAGAGGAAGGTGTCCGAATATTGAACTCGTGTTTGAAGTTTC AGTATTGAACTTATGAGATATTATTGC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_566288 DNA-binding enhancer-like protein [Arabidopsis thaliana]	503	3e-049
XP_002882482 hypothetical protein ARALYDRAFT_477968 [Arabidopsis lyrata subsp. lyrata]	494	4e-048
XP_002316045 predicted protein [Populus trichocarpa]	423	6e-040
XP_002311382 predicted protein [Populus trichocarpa]	418	2e-039
ABN07951 hypothetical protein MtrDRAFT_AC152185g3v2 [Medicago truncatula]	410	2e-038

Swiss-Prot top hits (Blast detail)	Score	e value
Q9NX55 Huntingtin-interacting protein K	184	2e-013
Q2PFU1 Huntingtin-interacting protein K	184	2e-013
Q9CR41 Huntingtin-interacting protein K	184	2e-013

TrEMBL top hits (Blast detail)	Score	e value
Q9C901 Putative uncharacterized protein	503	2e-049
B9HX26 Predicted protein	423	4e-040
A9PBV5 Predicted protein	418	2e-039
A2Q2W3 Putative uncharacterized protein	410	1e-038
C6T4C6 Putative uncharacterized protein	408	2e-038

Arabidopsis top hits (Blast detail)	Score	e value
AT3G06610.1 DNA-binding enhancer protein-related	504	1e-051

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	2			100%

Unigene Members	Member information