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Information for unigene UN48807
| FASTA Sequence |
| Unigene ID: UN48807 | Length: 1222 |
SSR | | GAGACAGAGACCGAGAGAGAGAGACCAAAAATGCAGTACAAGAATCTGGGGAAATCGGGATTGAAAGTGAGCACGCTCTCGTTCGG
AGCGTGGGTCACATTCGGGAACCAGCTGGACGTGAAAGAAGCCAAATCGATTCTCCAGTGCTGCCGTGATCACGGGGTCAACTTCT
TCGACAACGCCGAGGTCTACGCCAATGGCAGAGCCGAGGAGATTATGGGCCAGGCGATTCGTGAGCTGGGATGGCGCAGATCCGAC
GTCGTCGTCTCCACCAAGATCTTCTGGGGTGGTCCTGGTCCTAACGACAAAGGTTTGTCGAGGAAACATATCGTCGAAGGAACCAA
AGCTTCTCTCAAACGACTCGATATGGACTACGTCGATGTCCTCTATTGCCACAGGCCTGATGCTTCAACACCTATTGAGGAGACAG
TGAGGGCGATGAACTATGTGATTGATAAGGGCTGGGCGTTCTGCTGGGGAACAAGTGAATGGTCGGCTCAACAAATCACTGAGGCA
TGGGGAGCTGCTGAGAGGTTGGATTTGGTCGGTCCAATCGTTGAACAGCCTGAGTACAACATGTTTGCTAGGCACAAAGTTGAGTC
AGAGTTTCTTCCTCTGTACACCAACCATGGCATAGGTCTCACTACTTGGAGCCCACTTGCATCTGGTGTGCTCACTGGTAAATACA
ACAAGGGATCTATTCCCTCTGACAGCCGATTTGCTTTGGAGAATTACAAAAACCTTGCCGATAGATCACTTGTGGATGACGTGCTG
AGGAAAGTCAGCGGTCTCAAACCGATTGCAGATGAGCTAGGTGTAACTTTGGCTCAGCTTGCGATCGCGTGGTGTGCTTCAAATCC
TAACGTGTCATCCGTTATCACCGGTGCCACAAGAGAGTCACAGATTCAAGAAAACATGAAGGCTGTTGATGTGATCCCGTTGTTGA
CGCCACATGTTCTGGACAAGATCGAGCAAGTTATACAGAGCAAACCTAAACGTCCTGAATCATACCGGTAAAAACCAAAATCCTGA
GATCATTTGGAGGCTTGTGTGATGGTTGTTCTTGGAAGTTGCCACCTGTTGTCTTTGTTTGTTTTCATATGCATTCTAAGACTCGG
AGACAGAGAGAGTACTAATGTGTTGTTTTTCTAGTTTTGTTGGTTCCACATTTTAAAACGGTTCTATTGTTAGTGAAAACTTAAAA
GTTGGTTCTTGTAGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889520 hypothetical protein ARALYDRAFT_470455 [Arabidopsis lyrata subsp. lyrata] | 1689 | 5e-186 |
| NP_171963 potassium channel beta subunit 1 [Arabidopsis thaliana] | 1688 | 6e-186 |
| AAA87294 K+ channel protein [Arabidopsis thaliana] | 1663 | 5e-183 |
| XP_002518142 potassium channel beta, putative [Ricinus communis] | 1575 | 8e-173 |
| XP_002299286 predicted protein [Populus trichocarpa] | 1574 | 1e-172 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q40648 Probable voltage-gated potassium channel subunit beta | 1500 | 2e-165 |
| Q28528 Voltage-gated potassium channel subunit beta-1 | 874 | 6e-093 |
| Q4PJK1 Voltage-gated potassium channel subunit beta-1 | 869 | 2e-092 |
| P63143 Voltage-gated potassium channel subunit beta-1 | 869 | 2e-092 |
| P63144 Voltage-gated potassium channel subunit beta-1 | 869 | 2e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23016 Potassium channel beta subunit homolog | 1688 | 4e-186 |
| Q39151 K+ channel protein | 1663 | 3e-183 |
| B9RWM3 Potassium channel beta, putative | 1575 | 5e-173 |
| B9GMG6 Predicted protein | 1574 | 7e-173 |
| A9PDE6 Putative uncharacterized protein | 1571 | 2e-172 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G04690.1 KAB1 (POTASSIUM CHANNEL BETA SUBUNIT); oxidoreductase/ potassium channel | 1689 | 2e-188 |
| AT1G60680.1 aldo/keto reductase family protein | 262 | 5e-023 |
| AT1G60690.1 aldo/keto reductase family protein | 261 | 7e-023 |
| AT1G60710.1 ATB2; oxidoreductase | 242 | 1e-020 |
| AT5G53580.1 aldo/keto reductase family protein | 236 | 5e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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