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Information for unigene UN48809

FASTA Sequence
Unigene ID: UN48809Length: 1034 SSR 
CGGTTTGGAAATGTAATTAGCTTTTTAAGAAAATTTCAGAGTCTGATGAGAGTGGAATCCTAAAAAGATGGGACAGAGCAACAAGA
TTTGGAATGATCCTTAAAACATTTCATTGGTAAAGAAAGACAAGACTGACATGGCTCTCACGCACACTTCGCACTTCATTTACTCT
TCCATAGCTTCACCCACTTCTGTAATTTCAACTCGCTCCATCAATGGGGTGATTTTGGTGCGAAGAACCTCGGTTTTCTTGGTGAA
CGAATAGCCTTTGCTGCTGACATAGGTTCTTGGGTTTGGTTCCATGTAGTTTCTCAGATACTCCTTGTTCCCCTTAGTGATAACGC
GGATGTCCACGTCGCTACCACTACCCAGGTCGTTGAATATACCAGAGCAAATGGCCTCAGCGACCAGCTTAATTCCTTCATCCCTA
GTTAGACTTTCTTTGTACTTTGCCTCAAACACAGACATAGCAGCAAGAGAACCAGAACCCATTGTAGCGAATGGTAGAGTGTCCGT
TGAACCGTGTGGGTATATAGTATGAAGATGAGGACCAGTGATGTCAACTCCACCAAGGACGAGGGCAGCTGAGACATGACCTTGAT
AGCTGAAAGGGTGTTTCTTGAGGAGGGTCAAAGCAGTGATAACGCGAGAGTCTCGGCCAGTCTGGTAACGATGCAAACGCAGCTGT
GAGCTGACCATATCAGTGACAGCTTCAGTGTCAGCAGCGGTTCCAGCGCCACAGCAATAAATGTTAGGAGCCATGTAGTGAATTTT
CTCACAATTCTTATCAGCAACGATAGGCCCTTCAGTTGCTCGCGTATCCGCACCTAGTATCACACCGTCCTTGAAGATCAAACCGA
CGATGGTGGTTCCGGTCTTCAAAAAGGAACATCCACTGCTGACTGAGACATTTTTTTCTGGACACGACGAACTCTGCTCGAATCAA
CGTAGAAGACGACGGGAAAGAGAGAGCTGGAGCTTTTTTTTTTTGTTTGTTCACTAACGGAGAGAGAGAGAGCTGAAGCTAAGAAT
CC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875387 hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp. lyrata]11983e-129
NP_566818 proteasome subunit beta type-7-A [Arabidopsis thaliana]11957e-129
CAA73621 multicatalytic endopeptidase [Arabidopsis thaliana]11957e-129
XP_002888532 hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp. lyrata]11761e-126
NP_198874 proteasome subunit beta type-7-B [Arabidopsis thaliana]11751e-126

Swiss-Prot top hits (Blast detail)Scoree value
O23710 Proteasome subunit beta type-7-A11953e-130
Q7DLS1 Proteasome subunit beta type-7-B11756e-128
Q54QR2 Proteasome subunit beta type-78064e-085
Q9JHW0 Proteasome subunit beta type-77105e-074
Q99436 Proteasome subunit beta type-77071e-073

TrEMBL top hits (Blast detail)Scoree value
A9PFL7 Proteasome subunit beta type10989e-118
C0Z2Q3 Proteasome subunit beta type10989e-118
A9PCK6 Proteasome subunit beta type10899e-117
A2Q2I3 Proteasome subunit beta type10772e-115
B7FL37 Proteasome subunit beta type10729e-115

Arabidopsis top hits (Blast detail)Scoree value
AT3G27430.2 PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase11962e-131
AT5G40580.1 PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase11764e-129
AT5G40580.2 PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase11764e-129
AT3G27430.1 PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase10852e-118
AT4G31300.1 PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase2661e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information