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Information for unigene UN48810

FASTA Sequence
Unigene ID: UN48810Length: 1164 SSR 
GACTCAGAGAGGATAAGAGTTGCCTTCAGGAGAAAAGGGAACACAAATATTGTCAACAAGTTCACATCATAATGTTAAAACTCACT
ACCATGGGCTCTCACTTTAAATTCAAATCTTTTTACATTTCTAGACCCAAAGAATATTACTCAAAAGATGGAAATTTTCAAGCAAA
TACTCTGCTTTTGCTTCAATAGTGATATTTCCATGGGGGGAGATGGATGCTTCAGAGAGCTCAAGACCGCCTCAACATAGGAGACC
CCTCGGTTGGTTCTTGTAGGAGCTCTCGAGCAAGTCGCACTGGTCTGTCTTGAAGATACGCAATGTCGCTGTTTGGTGCTGTTATG
AGATGATGATCTTGTCCTTCTCCGTCTGTCTCGTCTGAGAGAGAAGATGCAGCTGATTCTTCTGATCCATCTTCATCATCAGAGAA
CTCAAGGGCTTCTGGCTGTCCAACAGTCGAGAGCTGTATGCTTTCTGGAAGGATACAGTTACAGAACGAACCTGCACGAGCCATCC
GGTTAATCCATCCGGGAATAGGCTTTCCTGTTACCTGCAAGCACACTTCCTCAGTGAAATGGTTACAGTTCTTGGCAATCAAATGG
TATGTGTCCCCATGATACTTCCTCGAAAGCTTCTCCATGAACGAGCGGAAATCTGAGGGAGACATGCTTGTGGTTCCCAACAAAAC
TGACCGCCTAAAGATGAAACCTGGACAGTTCCTAGGTTCAACTTCAAACACCCCACTGCTTGAGTACTCGTGAGCACCATATCCAT
ATTCGAAACCATGAGCTTCAATACCAGAGTGAAAGATGCCAAGACCAAACCAATAGAGATAATTGTTGACAGGTGTTAGATCATAG
ACGTTGAGGTACACGGGTGTTAAGCTGGCGTCTACAACCATCTCTTCAACCTCCTTCTCCTCAGATGAGCATAAGCTTGAGCTCAA
TCCGAGCACACGCATTTTACACAGATCCACCAAACAATCACTGTCTCTCTTCCCAATACAAATCCAAAATCAAACAATCATGACCT
CCCTCCTAAAATCTGTACGAATCTGGGGATCGGAGATTAGGGGAAAAGGACGGTCTCTTTTTTTTTGTTTCTTACAGGTTGATTGT
GCTGTCAGAAGGTAGAGAGAGAGAGAGAGGGGACAATGCTGCGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD64953 hypothetical protein 25.t00041 [Brassica oleracea]12352e-133
NP_199542 PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]11412e-122
XP_002865127 hypothetical protein ARALYDRAFT_494250 [Arabidopsis lyrata subsp. lyrata]11276e-121
NP_567528 PPPDE putative thiol peptidase-like protein [Arabidopsis thaliana]8741e-091
XP_002868060 hypothetical protein ARALYDRAFT_493128 [Arabidopsis lyrata subsp. lyrata]8606e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q93VG8 UPF0326 protein At4g174868792e-093
Q9D291 PPPDE peptidase domain-containing protein 13281e-029
Q5ZIV7 PPPDE peptidase domain-containing protein 13272e-029
Q5R456 PPPDE peptidase domain-containing protein 13272e-029
A3QRX8 PPPDE peptidase domain-containing protein 13262e-029

TrEMBL top hits (Blast detail)Scoree value
Q2A9R9 Putative uncharacterized protein12351e-133
Q9LVS8 At5g4731011411e-122
B9MUS7 Predicted protein8282e-086
B9SZQ1 Putative uncharacterized protein8246e-086
C6TEF8 Putative uncharacterized protein7833e-081

Arabidopsis top hits (Blast detail)Scoree value
AT5G47310.1 unknown protein11424e-125
AT4G17486.1 unknown protein8791e-094
AT4G17486.2 unknown protein6837e-072
AT1G47740.1 unknown protein5564e-057
AT1G47740.2 unknown protein5564e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
81  50%

Unigene MembersMember information