Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48814

FASTA Sequence
Unigene ID: UN48814Length: 1319 SSR 
GGATAATAAAAAAATTTGCAGACATTATTTTGTTACTGTCTAATAATGAGTCAGAGAAGAAGAAGAAGATCATAAGAACATAAAAG
GTTTAAGAAGAGAAATGGTAAAAGTTCAAATAAGATGATGATAATATAACATTTAGATTTTTTTTCTTTTTTTGGCCTCTGAACAA
AGTCTCAGGGAGCTTCAAATGTCTCTCCCGCCAGGTTCTAACTCTTTTGGATCATAAGAACCGGGGCCTCCGATCCGCAGGCTTAA
GAATTTGGAAAGAGCACATTAAACTCTCATCAACACTCATCATCGCACCAGCATTGTCGAATTCACCACAGTAGTTTGGAGCTCAA
AATATAGTAACAAGCTGTCTATCTGCAAAGAACTCATAGCCATCCTCTACAACCTGGTGGGCACGACAGATGAGATCCATATCGTT
CTTGATAAGAAACTCAGCAACTTTGTCAGGCCCAAACGTGTAAGAGGCACCACGGTCGTTCATCCCCCAGCCTTTTACATCTTTGC
TCGGATCAGACCAAAGCAGATCACATAGCAAACCGGTGTCCGGAACATCGGTAGGTCTCTTAATAGTCTTGATTTGCTCCACACTG
GTCAAATCGGGAGAAAGGCCACCGTGCATACACAGTATCTTATCGTCTATCACAGCAGCCACCGGGAGGCAGTTGAAAGAATCCGT
AAACACTTTCCAGAGCCTCACGCTGAACCTGCGTTTGCACTCGTCGTAGAATCCGTAGATTCTGTTGATGGAAGCGCACTCGTGGT
TGCCTCTTAGGAGGAAGAAGTTCTCAGGGTATTTGATTTTGTAGGCGAGGAGGAGGCAGATGGTCTCTAAGCTCTGCTTCCCGCGG
TCCACGTAGTCTCCTAAGAAGAGGTAGTTGGCTGTAGGAGGGAAGCCTCCGTACTGTCCATGTATATCACCGCAGATCTTGATGGG
AGCTTCGAGCTCAAGGAGGTTAGGCTGTTGAAGGAAAATCTCTTTGGATACGAGACAAAGCTGTCGGATCTCAGACTCGTTGAGCA
TGACCTGTTTGGTTCCAGGCTTAGGGTTTCTGTAATCCAACAGACGACGGATGATGTCGTCGAGAACGGCAGGGTCCATGCTTCCC
TGCGCCATTCAAAAGAGAACACGGTCCAAAACAACACCCTTCTGTCTACACAACAAAAAGTTTCAACCTTTCAGACAGTAATCGAT
CGCGCAGATAGCCAAAAAAGAAGATGATGATCTGTGTCTCGATCTTTGGACCATAAAAGTTTTCGCCTTTGTTTCCTCCAAGTTTA
CTTTTTTTTTTCTTTTTTCTTATTTCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002521968 serine/threonine protein phosphatase, putative [Ricinus communis]13501e-146
XP_002319103 predicted protein [Populus trichocarpa]13392e-145
NP_200724 serine/threonine-protein phosphatase PP1 isozyme 2 [Arabidopsis thaliana]12155e-131
XP_002866317 predicted protein [Arabidopsis lyrata subsp. lyrata]12155e-131
CAA78153 protein phosphatase 1A [Arabidopsis thaliana]12074e-130

Swiss-Prot top hits (Blast detail)Scoree value
P48482 Serine/threonine-protein phosphatase PP1 isozyme 212152e-132
P48485 Serine/threonine-protein phosphatase PP1 isozyme 511542e-125
P48489 Serine/threonine-protein phosphatase PP111329e-123
O04856 Serine/threonine-protein phosphatase PP1 isozyme 111283e-122
O04857 Serine/threonine-protein phosphatase PP1 isozyme 211247e-122

TrEMBL top hits (Blast detail)Scoree value
B9S7J9 Serine/threonine-protein phosphatase13507e-147
B9I5N0 Serine/threonine-protein phosphatase13391e-145
B9IP96 Serine/threonine-protein phosphatase13283e-144
Q0EAF3 Serine/threonine-protein phosphatase13166e-143
O65844 Serine/threonine-protein phosphatase13158e-143

Arabidopsis top hits (Blast detail)Scoree value
AT5G59160.1 TOPP2; protein serine/threonine phosphatase12161e-133
AT5G59160.2 TOPP2; protein serine/threonine phosphatase12161e-133
AT5G59160.3 TOPP2; protein serine/threonine phosphatase12161e-133
AT5G43380.1 TOPP6; protein serine/threonine phosphatase12152e-133
AT5G43380.2 TOPP6; protein serine/threonine phosphatase12152e-133

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
62  50%

Unigene MembersMember information