Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48816

FASTA Sequence
Unigene ID: UN48816Length: 876 SSR 
GGAAGAAGCTCAGATTCTCGGGACGACATTATCGCCTCCATTGTAGATCAATCAATTTCAATTTCAATTTCAATTCAAAGGCCTCC
TCTGAGATCTTCTTCCTTTTATCTTTGAAACCGTGTGGTAAAATATTGAATCTTCTTCTCTTTAGGCGAAAGGAAGATGAAGCATC
TCGATGATACACCCTCGACTCCAGGCAAGTTCAAGATCGACAAATCCCCCTACTTCCTCCACCGCACGCGCTGGCAATCATCCGCC
GCCAAGCTCGCCTTCTGGTCCCTCGTCTTCCTCGGCTTCATCTTCATCTTCTTCTACCGCTCCCCCTCCTCCTCCTCCTCCCTCCC
CGCCGCCGACCCCTCCCGCCGCTCCCTCCGCTCCTCCCCCTCCTGGGGCGGCCCCGCCTGGGAGAAACGCGTCAGATCCTCCGCCC
ACGTCCGCACCCGCTCCTCCCGCGGCGTCTCCGTCCTCGTCACCGGCGCCGCCGGTTTCGTCGGCACTCACGTCTCCTCCGCCTTG
AAACGCCGCGGCGACGGCGTCCTCGGCCTCGACAACTTCAACGACTACTACGACCCTTCCCTCAAGCGATCCCGCCAGGCCCTCCT
CGAGCGCGGCGGCGTCTTCGTCGTCGAGGGCGACATCAACGACGCCGCCCTCCTCAAGAAGCTCTTCGAGGTCGTCCCTTTCACCC
ACGTCATGCACCTCGCCGCTCAGGCCGGTGTCAGGTACGCTATGGGGAACCCTAGCTCCTACGTCCACAGCAACATCGCTGGGTTC
GTTAACCTCCTCGAGGTTTTGCAAGTCGGCGAATCCTCAGCCGGCGATCGTGTGGGCTTCCTCTAGCTCTGTCTATGGATTGAACA
CGAAAGTGCCTTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892033 UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]8668e-091
NP_171702 UDP-D-glucuronate 4-epimerase 2 [Arabidopsis thaliana]8523e-089
NP_191922 UDP-D-glucuronate 4-epimerase 3 [Arabidopsis thaliana]8497e-089
XP_002872971 UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]8433e-088
XP_002301280 predicted protein [Populus trichocarpa]8291e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q9LPC1 UDP-glucuronate 4-epimerase 28521e-090
O81312 UDP-glucuronate 4-epimerase 38493e-090
O22141 UDP-glucuronate 4-epimerase 47671e-080
Q9STI6 UDP-glucuronate 4-epimerase 56405e-066
Q9LIS3 UDP-glucuronate 4-epimerase 65223e-052

TrEMBL top hits (Blast detail)Scoree value
B9GPE9 Predicted protein8291e-086
D2WK30 UDP-D-glucuronic acid 4-epimerase8012e-083
B9IBY6 Predicted protein7975e-083
A5C3Y4 Putative uncharacterized protein7501e-077
A5B5D4 Putative uncharacterized protein6864e-070

Arabidopsis top hits (Blast detail)Scoree value
AT1G02000.1 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2); UDP-glucuronate 4-epimerase/ catalytic8807e-095
AT4G00110.1 GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic8493e-091
AT2G45310.1 GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4); binding / catalytic/ coenzyme binding / racemase and epimerase, acting on carbohydrates and derivatives7679e-082
AT4G12250.1 GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic6405e-067
AT3G23820.1 GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic5222e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  33%
 
212  67%

Unigene MembersMember information