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Information for unigene UN48817

FASTA Sequence
Unigene ID: UN48817Length: 1167 SSR 
GGACTGATCGACCTTCCCACTAACTAACAACAGATCCACAAGCGAATCGGATCGGCGAGCCTAGAGAGAGAGAGAGATGGTGACGA
AGACGGAGGAGACGGAGCTAAACCAACTCGAGAATCAAGTGGAGAACGGAGGAGGAGGTGTTTGGGAGTATCTGTGCCTCGTCCGT
AAGCTCAAGGTTCGCCGATCAGAGCTTGTGCTCAAGCACGGTCTCTCGATCTTGAACGATCCGGGAAAGCGATCCGCTCTTGGTCC
TGATGAATGGACCCTTTATGAGCAGGTAGCAATTGCAGCTATGGATTGTCAATCTCTTGCTGTTGCACAGAATTGCATCAAGGTTC
TGCAGAAGAAGTTTCCGGAGAGCAAACGTGTGGGAAAGCTGGAGGCGTTGCTTCTAGAAGCAAAGGGGATGTGGGAAGAGGCTGAA
AAAGCCTATTCAATCCTTTTGGAGGATAATCCACTCGATCAAGTAATACACAAAAGAAAGGTGGCTATGGCCAAGGCGCAGGGCAA
ACCTTCCTTAGCCATTGAACATCTTAACAAATATCTTGAAGTATTCATGGCTGATCATGATGCATGGAGAGAACTTGCAGAAATTT
ATGTTTCCTTGCAAATGTACAAACAAGCAGCTTTCTGTTACGAGGAGCTCATTTTATCTCAGCCTACTCTTCCATTGTACCACTTA
GCATATGCCGAGGTACTCTATACGATTGGTGGACATGAAAACCTCATCGCAGCAAGAAAGTACTATGCATCAACCATAGACCTTAC
AGGTGGTAAAAGCACAAGAGCCCTCTTTGGATTATGCTTGTGTGGATCAGCAATAGCACAGCTCTCAAAAGGCAGGAACAAAGAGG
ACAAGGACATGGCTGCACCAGAGCTTCAGTCTCTAGCTGCAACTGCTCTGGAGAAAGAGTACAAGCAAAAAGCTCCTGCCAAACTC
AACCTACTCTTTTTTGCATTAAGAAGCTTGAAGCTCTAGTAAGTTCATCAGAGGCCCATCAGAGTAAAAACGCTGGCTCACATTTT
TCTTGGTTAAAGCTTTTTTTTTTGTTGTCAGAATTTTATCTCGTTGTTCTCGCTTATTTTATTTTCACTCTTGATTTATTATTTAC
TGGCTCTTATATACACTGTTTACTAGAGGTGTTTAATCAAGTTAATTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882376 binding protein [Arabidopsis lyrata subsp. lyrata]14556e-159
NP_850995 prenylyltransferase-like protein [Arabidopsis thaliana]14422e-157
NP_566239 prenylyltransferase-like protein [Arabidopsis thaliana]13841e-150
NP_198174 O-linked GlcNAc transferase-like protein [Arabidopsis thaliana]12773e-138
XP_002874419 hypothetical protein ARALYDRAFT_489645 [Arabidopsis lyrata subsp. lyrata]12763e-138

Swiss-Prot top hits (Blast detail)Scoree value
Q6TGY8 Tetratricopeptide repeat protein 354777e-047
Q6INS3 Tetratricopeptide repeat protein 35-A4679e-046
Q8AVU9 Tetratricopeptide repeat protein 35-B4606e-045
Q5M7J9 Tetratricopeptide repeat protein 354606e-045
Q5R882 Tetratricopeptide repeat protein 354534e-044

TrEMBL top hits (Blast detail)Scoree value
Q9CAU9 Contains similarity to O-linked GlcNAc transferases14421e-157
Q93WC8 Putative uncharacterized protein At3g0483013847e-151
Q9S9L2 At5g2822012637e-137
B9MZF5 Predicted protein12413e-134
B9I5D8 Predicted protein12199e-132

Arabidopsis top hits (Blast detail)Scoree value
AT3G04830.1 binding14427e-160
AT3G04830.2 binding14032e-155
AT5G28220.1 binding12771e-140

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  40%
 
83  60%

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