Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48818

FASTA Sequence
Unigene ID: UN48818Length: 1020 SSR 
GGTAGCAAAGGTAAATAAACTAATAAAGAAAGAAGATCCCAAAACTCTCTCTCTCTCTCTCTCTCTCTCTGAGCTGAGTCGGTGGC
GGACTCAATGGGTCAGGAATCGTTCATCTACAGCTTCGTGGCGAGAGGAACTATGATCCTGGCGGAGTACACGGAGTTCACAGGCA
ACTTCCCGTCGATAGCAGCACAGTGTCTCCAGAAGCTTCCTTCCTCCAGCAACAGCAAGTTCACTTACAACTGCGATCACCACACC
TTCAACTTCCTCGTCGAAGATGGCTTCGCATATTGTGTGGTGGCGAAAGATGCTCAAAGCAAGCAAATCTCGATCGTATTTCTGGA
GAGGGTGAAAGCTGATTTCAATAAAGGTATGGGGGTGGAAAAGCAAGTACAGCTATCCCCAAAAGTCTCAACAAGGAGTTCGGGCC
GGTGATGAAAGAACACATGAAGTATATTGTTGACCATGCAGAGGAGATTGAAAAGCTAATCAAAGTCAAGGCTCAAGTTTCAGAAG
TCAAAAGTATAATGTTGGAGAATATTGACAAGGCAATCGACAGAGGAGAAAATCTGACGGTTCTTACTGACAAGACCGAGAATCTA
CGCTCTCAGGCGCAAGAGTACAAGAAACAAGGGACACAAGTGAGGAGGAAACTGTGGTACCAGAACATGAAGATAAAACTTGTGGT
TCTCGGGATCTTGCTACTACTTGTTCTCATTATCTGGCTTTCGGTTTGTCACGGTTTTAATTGCACTGATTGAAGACAACTTCAGA
ATGTGATGTTAGAGAGACTTTGGCGAGGAATGGTGTCTGGGACAAAAGTCTCCGGTAGAGGAGGGGTAGTAGGAGACTGAGGGAGA
GGGACAAAATGATATTTACTTTGGATGTTGTATGATTAAAAGTTGTTATTTTTTAAGCTACGGACCAGGACCATTTGCAACTTGCA
CGTTGGGTAGCAATCAGTTGCAATGAAATGTAATCTTTACTTTCATCCTTCAAGAACAACTTATATTTAGCGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
O23429 RecName: Full=Vesicle-associated membrane protein 724; Short=AtVAMP724; AltName: Full=SYBL1-like protein6535e-066
NP_193313 vesicle-associated membrane protein 724 [Arabidopsis thaliana]6491e-065
XP_002868180 hypothetical protein ARALYDRAFT_915207 [Arabidopsis lyrata subsp. lyrata]6482e-065
ACU20505 unknown [Glycine max]6177e-062
ACJ84394 unknown [Medicago truncatula]6024e-060

Swiss-Prot top hits (Blast detail)Scoree value
O23429 Vesicle-associated membrane protein 7246532e-067
Q9MAS5 Putative vesicle-associated membrane protein 7264821e-047
P47192 Vesicle-associated membrane protein 7224784e-047
O48850 Vesicle-associated membrane protein 7254767e-047
Q9ZTW3 Vesicle-associated membrane protein 7214732e-046

TrEMBL top hits (Blast detail)Scoree value
C6TFA3 Putative uncharacterized protein6175e-062
B7FI15 Putative uncharacterized protein6023e-060
C6T3S1 Putative uncharacterized protein5971e-059
B9RT39 Vesicle-associated membrane protein, putative5961e-059
B9N529 Predicted protein5826e-058

Arabidopsis top hits (Blast detail)Scoree value
AT4G15780.1 ATVAMP7246504e-068
AT1G04760.1 ATVAMP7264821e-048
AT2G33120.1 SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)4784e-048
AT2G33120.2 SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)4784e-048
AT2G32670.1 ATVAMP7254766e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information