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Information for unigene UN48855
| FASTA Sequence |
| Unigene ID: UN48855 | Length: 1276 |
SSR | | GGAATCTTCTTCTCCCTCATCGACTCCACTTCTTCGCTCATCCACGCAGGAAGGAAGGGAAGGTTTTATTACTTAGCAAATCCAAT
TCTTTCTGTGAGATAATATTACTTTTGAGAGAGAGAGACTGAGACAATGTTTGGTTTGAGGAAATCACCGGCTAAGCTTCCCAAGC
ACCACTCTGCTGATCCAGGTGTCCACAAATCTTCCAAGCCCAATCCTTTCGACTCAGACGATGAATTGGACAGCAACAACAACAAG
AACAACAAACACACACTTAACCCCTCCAAGAGGACTTCCTCTGAACCTTCCTTGGCTGAAATGACCACCACCAACCCTTTTGATGG
TGGTGATAAGGTTCATACTTCTTCATCCAAGCCGTCCTCTAACTCCAGATACCAGTACAAGAACAACTTCCGCGATTCCGGAGGCG
TTGAAAGCCAGTCTGTTCAGGAGCTTGAGGGCTATGCTGTTTACAAGGCTGAGGAGACTACCAAATCTGTACAGGGCTGTCTCAAG
GTGGCTGAGGATATTAGGTCTGATGCGACTAGGACTTTGGTTATGTTGCACGAGCAGGGCGAGCAGATCACCAGGACGCACCATCA
AGCCGTTGAAATTGATCATGATCTCAGTAGAGGTGAGAAGCTTCTTGGAAGCCTTGGAGGTATGTTTTCAAAGACTTGGAAGCCCA
AGAAGACTCGCCCTATAAATGGTCCAGTCATAACTAGAGATCACTCACCAACGAGAAGAATTAACCATTTGGAGAAAAGGGAGAAA
CTGGGACTGAACCCACCACCAAAAGCACAATCAAGAAGCAGAGAACCGCTTCCTGAATCAGCTGATGCTTATCAAAGAGTGGAGAT
GGAGAAGCCAAGCAAGACGATGGGCTTTCAGATTTGAGTGATATACTGGGAGAGCTAAAGAACATGGCAGTCGACATGGGAAGTGA
AATCGAAAAGCAGAACAAAGGACTGGATCATCTTCAAGATGATGTTGACGAACTCAACTTCAGAGTCCAACAATCTAACCAACGCG
GCCGCCATTTACTCCGAAAGTAATGAGCAGATCTCATTAGTCACTACACTACTTGCTCTTTTGTTCGATCTTCTCTGATCTTCGTT
GCTTAAAACTCAACCCGGTTCTTATCATTGTTATATACATACGTTTCTGTCTATGTTTGCATTTGATAGTATGATGAAAAACCAAT
ACTCTTTATTGTGCAAACTTAGGCAATCTTGCTGTTGTTTTTCTGTATCATAAAGATGAATAGTGTTTTTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34130 unnamed protein product [Thellungiella halophila] | 1047 | 1e-111 |
| XP_002864724 synaptosomal-associated protein 33 [Arabidopsis lyrata subsp. lyrata] | 992 | 3e-105 |
| NP_200929 SNAP25 homologous protein SNAP33 [Arabidopsis thaliana] | 990 | 6e-105 |
| AAM62553 snap25a [Arabidopsis thaliana] | 981 | 6e-104 |
| XP_002322041 predicted protein [Populus trichocarpa] | 813 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7P9 SNAP25 homologous protein SNAP33 | 990 | 2e-106 |
| Q9SD96 SNAP25 homologous protein SNAP29 | 526 | 2e-052 |
| Q9LMG8 Putative SNAP25 homologous protein SNAP30 | 503 | 7e-050 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IE11 Predicted protein | 813 | 1e-084 |
| B9RLS5 Synaptosomal associated protein, putative | 778 | 1e-080 |
| B9I2W3 Predicted protein | 727 | 1e-074 |
| C6TJG5 Putative uncharacterized protein | 641 | 1e-064 |
| C6T803 Putative uncharacterized protein | 622 | 2e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61210.1 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33); SNAP receptor/ protein binding | 1025 | 2e-111 |
| AT5G07880.1 SNAP29; SNAP receptor | 526 | 1e-053 |
| AT1G13890.1 SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30); SNAP receptor | 503 | 6e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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