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Information for unigene UN48870

FASTA Sequence
Unigene ID: UN48870Length: 1050 SSR 
AAAACTTGGCTGATCTCTCTCTACAAAATCGCCGATCAACCATGAGCAAAGGTCCAGGAATGTTCTCGGATATCGGCAAAAAAGCC
AAAGATCTGTTGACGAGAGACTACACCTCCGATCACAAATTCAGTATCTCCACTTACAGTGCCTCCGGCGTGGCCCTTACGTCTAC
TGCTCTCAAGAAAGGAGGCGTGCATGCTGCTGATGTTGCCACTCAATACAAGTACAAGAATGCTGTCTTCGACGTCAAAGTCGACA
CTGATTCCACTATTTTGACAACTGTCACTTTCACTGAGATCCTCCCATCCACCAAAGCCATCGTCTCCTTCAAAGTCCCTGACAAC
AGTTCCGGCAAGCTCGAGGTCCAGTACTTCCACGACCACGCCACTGTTACCGCTGCTGCAGCTTTGAAGCAGAACCCACTGATCGA
CATAACAGCCACTCTAGGTACACCAGTCATCTCATTTGGTGCTGAAGCTGGATACGACACCTCCTCCAAAACTTTCACCAAGTACA
ACGCTGGAATCAGTGTCGCCAAACCAGATGCTTCCGCTTCCATTATACTGGGAGACAAAGGAGACTCAATCAAAGCATCTTACCTT
CATCACCTCGACGAATCCAAGAGAAGTGCAGCAGTGGGTGAGGTTTACAGGAAATTCTCGACTAATGAGAACACGATAACTGTTGG
TGGGTCATACGCGATTGATCCCTCGACTTCGGTGAAAGCTAAATTCAACAGCCGTGGCACACTCGGTGCTTTTTTTCAGCACGAGG
TCTTGCCCAAATCGCTAGTGACTGTTTCCAGTGAGATCGACACTAGGGCCTTAGACAAGCATCCAAGGTTTGGTCTTTCACTTGCT
CTCAAACCTTGAGAGAACAACACACACACACGTAACACTGAGATGAGTCTCCGTACCATTTTTTTATTCTCTCTCATTTGTTGAAT
TTTACGGCAGGATCCGTGGGTTTACTCTCCACATGAATAAGTAGTTCCGACGCAGTGAAATTGACGGTTAATTCTTTTACGAATAT
GCTTTTTCTTATTGACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAW22622 porin-like protein [Brassica napus]12602e-136
NP_201551 voltage dependent anion channel 2 [Arabidopsis thaliana]12413e-134
XP_002866701 hypothetical protein ARALYDRAFT_496845 [Arabidopsis lyrata subsp. lyrata]12396e-134
XP_002877711 hypothetical protein ARALYDRAFT_323570 [Arabidopsis lyrata subsp. lyrata]11608e-125
AAQ87022 VDAC2.1 [Lotus japonicus]10658e-114

Swiss-Prot top hits (Blast detail)Scoree value
P42055 Mitochondrial outer membrane protein porin of 34 kDa7402e-077
P42056 Mitochondrial outer membrane protein porin of 36 kDa7251e-075
P42054 Outer plastidial membrane protein porin7161e-074
Q9SRH5 Mitochondrial outer membrane protein porin 16953e-072
Q9SMX3 Mitochondrial outer membrane protein porin 26882e-071

TrEMBL top hits (Blast detail)Scoree value
Q5MD14 Porin-like protein12601e-136
Q9FJX3 At5g6750012412e-134
Q6W2J2 VDAC2.110656e-114
B9H6N6 Porin/voltage-dependent anion-selective channel protein10648e-114
A5AQ65 Putative uncharacterized protein10631e-113

Arabidopsis top hits (Blast detail)Scoree value
AT5G67500.1 VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2); voltage-gated anion channel12421e-136
AT3G01280.1 VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1); voltage-gated anion channel6962e-073
AT5G15090.1 VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3); voltage-gated anion channel6891e-072
AT5G57490.1 VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4); voltage-gated anion channel6594e-069
AT3G49920.1 VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5); voltage-gated anion channel4873e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information