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Information for unigene UN48879
| FASTA Sequence |
| Unigene ID: UN48879 | Length: 992 |
SSR | | GGTCTCTCCCATTCTTTAAATCTCTCCCTCTCTCTCTCTGATCATCTCCAAACCCCAGAAACCTCAAATCTGATGGAGATCTGCAC
ATACTTAAAATCCCAGCCGTCTTGGCTCCTCCTCCTCTTCGCCCTCGGCTCCCTCCAACTCCTCAAACTCACCCTCTCCCTCCTCA
CCTCCCTCTACATCTACTTCCTCCGCCCCGCCAAAAACCTCCGCCGCCGCTACGGCTCCTGGGCCATCATCACCGGCCCCACCGAC
GGCATCGGCAAAGCCTTCGCCTTTCAGCTCTCCCGCAAAGGCCTCAACCTCGTCCTCGTCGCCCGCAACCCCGACAAGCTCGCCGA
CGTCTCCGACTCCATCAGATCCAAACACCCCGACGTCCAGATCAAGACCGTGCTCATGGACTTCTCCGGGGACATCGACGAAGGCG
TGAGGCGGATCAAGGAGACGATCGAAGGGTTGGAGGTTGGGGTTCTGATTAATAACGCGGGCATGTCGTATCCTTACGCGAAGTAC
TTTCACGAGGTTGATGAGGAGTTGGTTAAGGGTTTGATTAAGATTAATGTGGAAGGGGCGACGAAGGTGACGCAGGCTGTGTTGCC
TGGGATGTTGGAGAGGAAGAGGGGGGCGATTGTTAATATAGGGTATGAAGCACGCTGCACGCCTTACTGGCCTCACGCCCTCATGG
GTTATGTTGTTTCCGCATTGCCCGAGAGCGTTTTTGAATCCTTTAACATTAAGAGGTGCCTCCAGATCAGGAAGAAGGGTATGCTT
AAAGACTCCAGGAAAAAGGAATGAAACTTTTCCGAGGGTGCAAGATTTTCTTTTGCCGCTTGCAAGTTTCTGTTTAGACTTTGTAA
GACTTGTACGCTTTAGCTTCCGATATTTCCAAGTTGTTTCCTTCTTTTTTTAAAGTTAAAAACCATAACGTCCATTGATCATTCAC
GTCCTCTCTGTTTTTATTTATTTATTTAAATAAAACTGAGTGTTCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAO43449 putative 3-ketoacyl-CoA reductase 2 [Brassica napus] | 805 | 1e-083 |
| AAO43448 putative 3-ketoacyl-CoA reductase 1 [Brassica napus] | 804 | 1e-083 |
| NP_564905 beta-ketoacyl reductase 1 [Arabidopsis thaliana] | 799 | 5e-083 |
| XP_002887140 hypothetical protein ARALYDRAFT_475877 [Arabidopsis lyrata subsp. lyrata] | 797 | 9e-083 |
| XP_002515031 steroid dehydrogenase, putative [Ricinus communis] | 743 | 2e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1DNC5 3-ketoacyl-CoA reductase | 385 | 2e-036 |
| A8N6B4 3-ketoacyl-CoA reductase | 377 | 2e-035 |
| Q0CY11 3-ketoacyl-CoA reductase | 354 | 1e-032 |
| Q2UET3 3-ketoacyl-CoA reductase | 352 | 2e-032 |
| Q5B0R9 3-ketoacyl-CoA reductase | 350 | 3e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84X95 Putative 3-ketoacyl-CoA reductase 2 | 805 | 8e-084 |
| Q84X96 Putative 3-ketoacyl-CoA reductase 1 | 804 | 1e-083 |
| Q8L9C4 Putative uncharacterized protein | 799 | 4e-083 |
| B9RMR2 Steroid dehydrogenase, putative | 743 | 1e-076 |
| B9HTF0 Predicted protein | 731 | 3e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G67730.1 YBR159; ketoreductase/ oxidoreductase | 804 | 6e-086 |
| AT1G24470.1 short-chain dehydrogenase/reductase (SDR) family protein | 399 | 5e-039 |
| AT1G62760.1 invertase/pectin methylesterase inhibitor family protein | 185 | 3e-014 |
| AT4G18670.1 protein binding / structural constituent of cell wall | 180 | 1e-013 |
| AT3G24550.1 ATPERK1 (PROLINE EXTENSIN-LIKE RECEPTOR KINASE 1); ATP binding / protein kinase | 172 | 1e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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