Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN48881

FASTA Sequence
Unigene ID: UN48881Length: 882 SSR 
GGGCTCTAATCAGTTTTAGTAGGCTAAACTTTCGAATATAAAATGGGTGTGTTCACTGGATTTGGTAGCTGGATCAATTTGAACAG
TCAACAGCCTCTTAAGGCCGAGTCCCAGAGATCTGAAAATGGCGAATCTAAGTCGGAGTCAGAGAAAGACACTACTAAGAAGAAGG
AGGAGGAGGAGGTGGTGTATTATGATGAAAAAGAGGACACGGGACAAGAGGGACTTTGGCATGAAGCAGAGAAGAAGCATCCATGG
CATAATACACCTCCCAAGATCAAGAAAAACACATCAAGAAAGGTTCTGAAGGAGAATGGTCCGAAGCGGGTCGTCATGGTAGAGAA
AGCTATGGCTTATAACTTCCTTTCGCTGACGACTATATCTATCCCGATACATCTAACTATGGAAGAAAACAGAAAAGCTCTTACGA
CAAAATATAAGAAAGAGAAAGTAATATTGATGAAAGAGTTCCACGGCAACTTTAAAGTGGAGCCTATATATGTAGATCAAGAACGG
TTGTGCAAAAAGAGGTTACCAAAGAGTCCAGAAGAATACAAAAAATGTAGCTGTGGCCGAGGAAGGATTGGGTCAAAACTTATAAT
AAACCAATACTTCCAGCCATATCCTCCATTTAATCTACCTCCGCTTTCTTGGTTCATCCGTGGGTTCACCATCAAAACCTCCAAAA
AAATGCTCAACTTGCTTCAGGACATGGCTTTTTCTTTACGACAGGCAGGGCCTCCCTCAGAATAAGCCATCAAAGTTAGAGAAAAC
TATGTTGTTGAATACATAATTTTTAGAAATATAGAAGATTGTAAGTAAACATACAAAAAAAAAACTGTTTATCGCGTATGATTATT
TTGGTATCGACTACCGCAGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF79591 F28C11.19 [Arabidopsis thaliana]6964e-071
AAC98020 Similar to OBP32pep protein gb|U37698 from Arabidopsis thaliana6831e-069
NP_001077587 uncharacterized protein [Arabidopsis thaliana]6768e-069
ABK28412 unknown [Arabidopsis thaliana]6768e-069
XP_002893299 hypothetical protein ARALYDRAFT_313226 [Arabidopsis lyrata subsp. lyrata]6571e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LQC3 F28C11.196963e-071
Q9ZUD0 F5O8.20 protein6839e-070
A0ME88 Putative uncharacterized protein (Fragment)6766e-069
Q1PFT1 Putative uncharacterized protein6766e-069
B3H736 Uncharacterized protein At1g23570.16462e-065

Arabidopsis top hits (Blast detail)Scoree value
AT1G23570.2 unknown protein6763e-071
AT1G23570.1 unknown protein6567e-069
AT1G23600.2 unknown protein5626e-058
AT1G23580.1 unknown protein4962e-050
AT1G23570.3 unknown protein4641e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  50%
 
121  50%

Unigene MembersMember information