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Information for unigene UN48891

FASTA Sequence
Unigene ID: UN48891Length: 1271 SSR 
ATGACAAAACAGATGAATTTTATATATAATAAGAATTTATAGGACCGAATCAAACAACCAATACGACTACAAAGACGCAACAAAAA
GAAGAGTTTTCATAAAACGTGACTAGGTTGATTAGAGAGATCTCCAATGCTAAGAGTGGTCATCATCATCATCAACCTAGAAACAA
CCCTCTAGTTTCACTGACTCTCTTGATTGTTACACACGAAGACAAGATAACAGGAAAAGAGAACTGACTGAACTCTCTCTTTTTTA
GCATGGACTTTACATGATGGTGCATCGACCCTTTTCTTCATTTGGTTGCGCCGGCATTTGCTGGAACCGGTGCGACTCTGAGGGAT
TGTATGTGAACTCAGATGTGTCAAGCCCATACTTCTCCCTCATACGTGCACTCCAAGGGTCACTGCGGCTCGGGCGTTGGTCCAAA
GTAGGAGCGACTGGGACACCGGTGACAGGGGCGGGCTGGCGGTTGATGAACGGCTGCCTGATCTGTTGCCTTGGAGGAGTAATAAA
CTCATCGTCACTGTCATACTCCGCTGGTGTATTAGCTGCCCTAACCATAAGGGCAAGCAAGAAAAGCAAAGCCTCGAAAACAACGG
CTCCTAGAGCTACCCATCTTACGATGTTCCAGTTTTCTCTGAGAAAATTATAGATGGTATCGAAGTTCCCAGTCCTGTCAGAAGGA
ATTTCATCTCTCCAGCTGTTGTCGAAGAATTTAAACGCAGCAGCTCCAAGCTCCGCCAAGATCAACAAGATGAGAAGCAGAGAGTA
ACAAGATAAGCAGCAGACGTTCCTTGAACAAGTTCCAACACAGCCGCAGCATGAAATAACAAACAGAGCCACTCCGATACCAATAA
ACAAGTAGATGAACCAAGCTTTGGGGAGATTGTCAAAGACATTGGAAGAGAGAGCAAGAGACATAAGCATGGGCCTCCCAAAAGAG
ACGTAACTCTGGTGGTCGTCGGCACTGAAGTTAAGAGAGTTGTCGGATGCTCTCTTGAACTCGACAAACAAGTAGATACCATAACC
AATCATGCCAAGTCCAGCAACCGCCAGAATAAAGTTTAGTAACTTTAGCAAACACTCCAAACAACCTCTACATGCCATTTTTTTAC
AACTCAGCTGTTATATGGTTTTGTTCCGTTGGAAGAATTCTCGGAGAGTGGATTGCTTGAGATGATGAGTCTTCGATCTTCTTCGA
GCTAAGGTCTCGGTGGATTAGTTTAGCTTTTATTTTTCTTGTCGCCGAGAGGAATGGGGAAAAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564399 tobamovirus multiplication 2A protein [Arabidopsis thaliana]13437e-146
BAJ34310 unnamed protein product [Thellungiella halophila]13401e-145
XP_002893721 hypothetical protein ARALYDRAFT_473428 [Arabidopsis lyrata subsp. lyrata]13231e-143
ABK92751 unknown [Populus trichocarpa]10722e-114
XP_002527636 conserved hypothetical protein [Ricinus communis]10669e-114

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5W7 At1g32400/F5D14_2213434e-146
A9P8P8 Putative uncharacterized protein10721e-114
B9SNR7 Putative uncharacterized protein10666e-114
C6THF2 Putative uncharacterized protein10551e-112
C6TMZ7 Putative uncharacterized protein10452e-111

Arabidopsis top hits (Blast detail)Scoree value
AT1G32400.1 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13442e-148
AT1G32400.2 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13442e-148
AT1G32400.3 TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding13442e-148
AT4G28770.1 FUNCTIONS IN: molecular_function unknown; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20230.1); Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2464e-021
AT2G20740.2 unknown protein2393e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
121  33%

Unigene MembersMember information