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Information for unigene UN48897

FASTA Sequence
Unigene ID: UN48897Length: 1267 SSR 
GGAACACAGAAGAAAGCTGGAAAATAAAAAAAATCCCTTCTTTCCTGCAGAAGAAAAGAAAAGAGAGAATCTATCGAACATAAATC
TCCGATAGGTTTTGTTGAATCTTGTGAATTAGTGAAGATGATGGTAGCAGCTATTAACAGCTTCGATCTTTGGCAAAAGGATGTTT
TTTTCTCGGCAGCAGAGGAGGTTCAAGAATCTGCCGATACAATGGAATCTGCGTATAGGGTTTGGATTAAAGAGAAGAGACAAGGT
CGATCAGACCAGCTCTGCATTGAACTTCAAGCTGCTTTGAGCACTGCTAAATGGCAGCTGGAAGAGTTTGAGAGGGCAGTGAGGCT
GAGCCACCGTGGACATTGCCGAGACGACACTACCTTGACTAGGCATAAACAGTTTGTCAACGCTATCGAGAACCAGATTCACCGAG
TGCAGTCCGCACTGCAAGAGGCTTTAACCGAGAACGGGAAACAGCCTCTGCGTTTGGTTGATCTCAACAAAGAAGAGCGTGACGAC
CTCGCCATGTTTCTCTCTGGCTCTTCTTCTTCTCTGACCTCGGAGAGTTTCAGCAGTGGAAGAAGAAGCACCAACTTGAGAGACTC
CTCGACTAGCTCCTTGGCAGAAAACACGCGTGGGAGAAGAGAGACTAGCTGTGTGATAGACATTGTTGACGAGGGAGGTAGCCCTG
TAAGTGCTGATGCTGTGATCCGCGTGCAGCAGGGTGGTGATAAAAGGTCGGGGACGAGAAGAACATGGAGTTCACCGAATGTTCCT
AACGTAACTGCGTTGAGGATTAATGTGGAAGAAGAGGAGGAGAAGAAGAAGAAGAAGAAGAGACTTGTGTTTGACATTGAAGACAC
TCCTAAGGAGAAAGGATCTAAACCTCTGTTTTCGATGCAGAGATGTCGTGATTATAACCTTAGCTTTGACAGAGTCAGACAATATC
AAAGGAGGTTTCGTGTTCCATTTAGCAGACCGGTCCAGCTCATTCTTTCCTTCACGCTAATCTTGCTTCTTCTATTACTATTTCGA
GTTTATTAGTCTTGACAACTTTAAACTGTGGTTTCCTGAAACGCTCGAGAACATTTGACAAGGTTACATATTCTTGCTTGTTGGTC
CATTCGAAGAACAAGCCTGCATTTTCTTTACTTTCGTTTGTCCTCAAGGAAACATATATAGGAACTTGTAACTTTGTAGGTCTATT
TGTAAAGTATACTAAAAAGAATTTGTGTGTTGTTGTTACAAATCGATGCGTTTAAGGTTGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867360 hypothetical protein ARALYDRAFT_491727 [Arabidopsis lyrata subsp. lyrata]10443e-111
CAB52468 putative protein [Arabidopsis thaliana]10013e-106
NP_567842 Syntaxin/t-SNARE family protein [Arabidopsis thaliana]10004e-106
NP_179476 Syntaxin/t-SNARE family protein [Arabidopsis thaliana]7227e-074
AAD08955 unknown protein [Arabidopsis thaliana]6511e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SUM0 Putative uncharacterized protein AT4g3024010012e-106
Q944G8 AT4g30240/F9N11_9010003e-106
Q501A1 At2g188607252e-074
O64616 Putative uncharacterized protein At2g188606543e-066
A8MQE6 Uncharacterized protein At2g18860.26123e-061

Arabidopsis top hits (Blast detail)Scoree value
AT4G30240.1 protein binding10001e-108
AT2G18860.1 syntaxin family protein7269e-077
AT2G18860.2 syntaxin family protein6131e-063
AT1G27700.1 protein binding3315e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
81  33%

Unigene MembersMember information