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Information for unigene UN48903

FASTA Sequence
Unigene ID: UN48903Length: 1117 SSR 
GGAATTCCAAGCCCTAAAAATTTCGACCTCGCTTCACCACAGTAGCCGAGTGAGAGAGAGAGAGAGAGAGAGATGGCGCTGCAAGA
TGAGCAAGAGCACGAGGTGTACGGTGGAGACATCCCAGAGGAGGACGAAGGCGAGATGGAGACGGACGAGTATCTAGAACACGCCG
GAGAAGAAGAAGAAGGCGCCGCCGCCGCCGCGGAAGACGAGGAGGAGCTAGAGCCAGGCTCTGCTTCTAGGGATTTAGAGGAGATG
AAGAAACGGATTAAGGAGATCGAGGAAGAGGCTAGTACTTTGCGTGAAATGCAAGCCAAAGCTGAGAACGATATGGCTGCTGCTCA
AGATCCATCAAGTGCTATTAGTGCGGTAGAGAAGGAGGAAGTGGATTTGCGTTCTATATATGTTGGCAATGTGGACTACGCATGTA
CTCCAGAGGAAGTCCAGCAGCATTTTCAATCCTGTTGGACGGTCAATAGGGTTACGATTCTGACAGATAAGTTTGGCCAACCCAAA
GGTTTTGCCTACGTGGAATTCGTGGAAGAAGAAGCCGTTCAGAATTCTCTTGTTTTGAACGAGACAGAACTGCGTGGTCGTCAGAT
AAAGGTATCTGCAAAGAGGACTAACGTCCCCGGGATGAGGCAATTCCGAGGAAGGCGCCCCTTCAGACCCATGAGGGGCTTCATGC
CCGGACCTCCATTCTATCCTCCATATGCTTATGGGAGAGTTCCCAGGTTCAGACGGCCAATGCGCTACAGACCATACTGATTGAAG
CAAATTGGTGTTAAAAGAGGTAGCAGCTGCCTTTTGTTTGAGGAAGGCTATTATCATCAACCTTGTTCATCAGGGCGCAAAGTTGC
TTCGCTTAAACAGAGATGGGTTTAAGAATTTTATGGAAGAGTGAGGCAAAGGAGGGAACTGTGTTTAGACTTTCTGTAACAATATT
TGATTTTCTTTTTTATTTGTCATTAAACTCAAAGCTTTTTACTGAGAATGACCTTCACGTTACTGAAAAACTTACAAAAACCAAGG
TCTCTCAGTTTGAAGGAGACCAAACATACAAACATTGTAACTTTTTTAATCATTAGACTTTTGATCACTAATATAGCCAGAATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM61036 contains similarity to poly(A)-binding protein II [Arabidopsis thaliana]10058e-107
NP_568751 polyadenylate-binding protein 1 [Arabidopsis thaliana]10012e-106
XP_002864097 hypothetical protein ARALYDRAFT_918145 [Arabidopsis lyrata subsp. lyrata]9905e-105
BAA97374 unnamed protein product [Arabidopsis thaliana]9279e-098
AEN74948 poly(A)-binding protein 1 [Citrus sinensis]8231e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q7KNF2 Polyadenylate-binding protein 23729e-035
Q9DDY9 Polyadenylate-binding protein 2-A3711e-034
Q7ZXB8 Polyadenylate-binding protein 2-B3702e-034
Q28ZX3 Polyadenylate-binding protein 23692e-034
Q8CCS6 Polyadenylate-binding protein 23692e-034

TrEMBL top hits (Blast detail)Scoree value
Q8LG48 Contains similarity to poly(A)-binding protein II10056e-107
Q93VI4 AT5g51120/MWD22_610012e-106
Q9LU62 Similarity to poly(A)-binding protein II9276e-098
B7FL26 Putative uncharacterized protein7313e-075
C6T4N1 Putative uncharacterized protein7261e-074

Arabidopsis top hits (Blast detail)Scoree value
AT5G51120.1 PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding10134e-110
AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein6452e-067
AT5G10350.1 polyadenylate-binding protein family protein / PABP family protein6263e-065
AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein5636e-058
AT2G16940.1 RNA recognition motif (RRM)-containing protein1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information