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Information for unigene UN48907

FASTA Sequence
Unigene ID: UN48907Length: 999 SSR 
GGAGGAGATCCGTATTGAAAGAAGAAGAAGAAGAAGAATCAAAGGATGAGTGGGCACGAGAATCACGACGATGACGTCAGCCGGAT
CTCTACTCCCTCCTCCGCATCATCGGATCCCAAAGCTCCTCACTCCTCTGACTACGCTCCTTACCCTAAGCTCGATCCCAACGACG
TCACTCCTCCTCCTCCTGCTCCCGTCTCCGGCAACAACGCCGCCACCACCATGCCGCCTGAGTTCAATCCTTACGTCTCTCCTTCC
CCTGTCCCCAAGAATACGATGGACTCTGTGAAGGACACGCTTGGGAAATGGGGGAAGATGGCAGCAGACGCCACCAAGAAGGCTCA
GGATCTCTCCGGGAACGTTTGGCAGCACTTGAAAACAGGACCAAGTGTAGCTGATGCTGCTGTTTCTCGAATCGCTCAGGGGACCA
AGATACTTGCGGAAGGTGGATATGAGAAGGTTTTCAAGCAGACTTTTGAGTGCTTTCCCGATGAGCAGCTTCGCAAGACCTATGCT
TGCTACTTGTCTACATCTGCTGGTCCTGTCATGGGTGTTATGTATCTTTCTACGCACAAGCTTGCTTTCTGTAGTGACGCTCCTCT
TTCCTACAAGGAAGGTGATCAGACCAAGTGGAGCTATTACAAGGTGGTACTTCCGGTGAACCAGCTCAAGGCAGTGAACCCGTCAA
CAAGCAGAGTGAACACGTTTGAGAAGTACATACAAGTGATTTCTGTCGACAACCACGAGTTTTGGTTTATGGGGTTTGTGACTTAT
GATAGCGCTGTCAAGAGCCTTCAAGAAGCTGTGCAGTCGCATGCTCCATGAGGCTCCACCGCCATCGGTGTCTCTAGTGTTGTGCA
TTATATGTATGGAACAGTGTGTGTGTACTTTTATACCATTTCAGTGTGTGTTGTACATTTTACTCTCCTGGGGAGTGATGATCATA
AAACATTACTTATGTTCATTTACTTTGTATGATTAAATTATTATGTTATTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893510 hypothetical protein ARALYDRAFT_890356 [Arabidopsis lyrata subsp. lyrata]11876e-128
NP_174141 GEM-like protein 1 [Arabidopsis thaliana]11411e-122
XP_002514008 conserved hypothetical protein [Ricinus communis]9205e-097
ACJ85492 unknown [Medicago truncatula]8812e-092
XP_002301081 predicted protein [Populus trichocarpa]8766e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q9SE96 GEM-like protein 111415e-124
Q8S8F8 GLABRA2 expression modulator7312e-076
Q9M063 Putative GEM-like protein 35592e-056
Q9LYV6 GEM-like protein 54256e-041
Q9M122 GEM-like protein 24013e-038

TrEMBL top hits (Blast detail)Scoree value
C6T907 Putative uncharacterized protein9321e-098
B9RJT9 Putative uncharacterized protein9204e-097
B7FL58 Putative uncharacterized protein8811e-092
B9GV21 Predicted protein8764e-092
A7LH72 GEM-like 18702e-091

Arabidopsis top hits (Blast detail)Scoree value
AT1G28200.1 FIP1 (FH INTERACTING PROTEIN 1)11424e-125
AT2G22475.1 GEM (GL2-EXPRESSION MODULATOR)7312e-077
AT2G22475.2 GEM (GL2-EXPRESSION MODULATOR)5232e-053
AT5G13200.1 GRAM domain-containing protein / ABA-responsive protein-related4255e-042
AT4G01600.1 GRAM domain-containing protein / ABA-responsive protein-related4013e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information