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Information for unigene UN48942
| FASTA Sequence |
| Unigene ID: UN48942 | Length: 1226 |
SSR | | GGGTTTTGTTCCGTGACTCTCTGTCGATCGTCTTCAACCCCAAACAACTGTCAGATTCTTCGTCGCTTTTGATCATTTCTTCCCTC
TCTCTCTCTCTCGCCATTGTCAGAAGGCTTACTGTGATTGGGATTGAATCTTCTGAATCATGAACTATCTTCGTGGAGCTTTCAAG
CCTGCATGTAACATTTCAATCACGTTCACTGATGGGAAGAATCGTAAACAGGTTCCGGTTAAGAAGGATAATGGACAAATGGTTAT
GAACCCACTTTTTCAGAGTCAATAAACTATTTCTGGCAAGGTTTGTATTGAACCGTATCAAGGGAAGAAAGTGGAGCACAATGGTG
TTAAAGTTGAGCTTCTTGGTCAAATAGAAATGTACTTTGACAGAGGAAACTTCTATGACTTTACTTCCCTAGTTCGGGAGCTTGAT
GTACCTGGAGAAATATATGAAAAGAAGACATACCCTTTTGAATTTTCGACCGTTGAGATGCCATATGAGACATACAATGGCGTGAA
TGTACGGCTAAGGTATGTCCTGAAAGTAACAGTTACACGTGGTTATGCTGGAAGTATCGTGGAGTATCAGGACTTTGTGGTACGCA
ACTATTCTCCACTACCTCCTATCAACAACAGCATCAAGATGGAAGTTGGAATCGAGGACTGCCTGCATATCGAGTTTGAGTACAAT
AAAAGCAAGTATCACCTGAAAGATGTTATCCTCGGGAAAGTATACTTTCTTCTGGTGAGAATCAAGATAAAGAATATGGATCTTGA
GATCAGACGGCGAGAGTCAACAGGAGCAGGAGCTAATACTCACGTCGAGACAGAAACATTAGCCAAATTTGAGTTAATGGATGGTG
CTCCCGTCAGAGGCGAATCAATACCTGTAAGACTGTTCTTGACACCATACGATCTGACGCCAACGCATAAGAACATAAACAACAAA
TTCAGTGTTAAGTATTATCTGAATCTTGTCCTGGTTGACGAAGAGGATCGCCGTTACTTCAAGCAACAAGAAATCACGTTGTACAG
GCTCAAGGAGAAGACTTCTTGATGTTTACAAAGAAAGAAAAGATACAAATGAGAATTTTTCAGAAAATTTGTAAAGCCTTTTTTTT
CTTAAGACTTCTTTTTTCTGTATGCAATTGGTTGGGGACTTGGTGGAGTCATGAAGTTTAAGTCATGTTGTTTGGATTCATGTAAG
AAAACTAGCAACTCTTTTTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200165 vacuolar protein sorting 26A [Arabidopsis thaliana] | 1516 | 5e-166 |
| XP_002865977 hypothetical protein ARALYDRAFT_331709 [Arabidopsis lyrata subsp. lyrata] | 1513 | 1e-165 |
| XP_002869547 hypothetical protein ARALYDRAFT_913758 [Arabidopsis lyrata subsp. lyrata] | 1471 | 9e-161 |
| NP_194499 vacuolar protein sorting-associated protein 26 [Arabidopsis thaliana] | 1466 | 3e-160 |
| XP_002274585 PREDICTED: hypothetical protein [Vitis vinifera] | 1427 | 1e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9T091 Vacuolar protein sorting-associated protein 26 | 1466 | 1e-161 |
| Q55CA0 Vacuolar protein sorting-associated protein 26 | 911 | 3e-097 |
| Q6TNP8 Vacuolar protein sorting-associated protein 26A | 910 | 4e-097 |
| O75436 Vacuolar protein sorting-associated protein 26A | 908 | 7e-097 |
| Q6AY86 Vacuolar protein sorting-associated protein 26A | 908 | 7e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FJD0 Vacuolar sorting protein-like | 1516 | 4e-166 |
| A9PCL0 Predicted protein | 1421 | 4e-155 |
| B9N808 Predicted protein | 1413 | 3e-154 |
| Q3HRZ1 Vacuolar protein sorting-associated protein 26-like protein | 1408 | 1e-153 |
| B9RPK9 Vacuolar protein sorting 26, vps26, putative | 1380 | 2e-150 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53530.1 VPS26A (VACUOLAR PROTEIN SORTING 26A) | 1517 | 2e-168 |
| AT4G27690.1 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1466 | 1e-162 |
| AT4G27690.2 VPS26B (VACUOLAR PROTEIN SORTING 26B) | 1326 | 2e-146 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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